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snakemake-workflows
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dna-seq-neoantigen-prediction
Snakemake workflow for neoantigen prediction
MIT License
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varlociraptor workflow compatibility
#23
dlaehnemann
opened
2 years ago
0
Set up Zenodo and do an initial release
#22
dlaehnemann
opened
2 years ago
0
Added config/README.md
#21
jafors
closed
3 years ago
0
Workflow updates
#20
jafors
closed
3 years ago
0
Cleanup
#19
jafors
closed
3 years ago
0
Removed pre-filtering and added bcftools norm to germline
#18
jafors
closed
3 years ago
0
Razers3 optional
#17
jafors
closed
3 years ago
0
Updates for microphaser rules
#16
jafors
closed
3 years ago
0
update
#15
jafors
closed
3 years ago
0
Annotation update
#14
jafors
closed
3 years ago
0
Updated filtering.smk
#13
jafors
closed
3 years ago
0
Hla parsing change
#12
jafors
closed
3 years ago
0
Updated varlociraptor calling
#11
jafors
closed
3 years ago
0
Linting and cleanup
#10
jafors
closed
3 years ago
0
Schuler mpm
#9
jafors
closed
4 years ago
0
hERV and retroelement neoantigens
#8
dlaehnemann
opened
4 years ago
0
prediction tools for neoantigens from gene fusions
#7
dlaehnemann
opened
4 years ago
0
prediction tools for neoantigens from tumor-specific alternative splicing
#6
dlaehnemann
opened
4 years ago
0
HLA allele callers / HLA typing tools
#5
dlaehnemann
opened
4 years ago
0
peptide binding prediction tools
#4
dlaehnemann
opened
4 years ago
0
Check out OpenVax tools and pipeines
#3
dlaehnemann
opened
4 years ago
0
Check out Isovar neoantigen prediction
#2
jafors
opened
4 years ago
1
Schuler mpm
#1
jafors
closed
5 years ago
0