A lot of snakemake keywords are not highlighted.
Especially rule params like mentioned in issue #23, #18 and #14.
The following rule params are not highlighted:
shellcmd
name
norun
conda_env
container_img
is_containerized
env_modules
shadow_depth
docstring
notebook
template_engine
cache
path_modifier
handover
default_target
localrule
Besides this, also no PEP keywords are highlighted #22 and, to my knowledge, also the kewords:
envvars
module
It would be nice to have a script which collects all keywords.
This is maybe possible from the parser.py file.
For the rule params the ruleinfo.py scripyt would be also possible.
As explained issue #15 built-in functions like expand are not highlighted properly.
This can be fixed by integrating the snakemake rules in the MagicPython grammar.
In my fork of this repo, I could implement this by copying and modifying the whole MagicPython grammar.
Unfortunately, I did not find a way to just use the include rule key to load the MagicPython grammar and overwrite the rules that I wanted to include the sankemake rules in.
A lot of snakemake keywords are not highlighted. Especially rule params like mentioned in issue #23, #18 and #14. The following rule params are not highlighted:
Besides this, also no PEP keywords are highlighted #22 and, to my knowledge, also the kewords:
It would be nice to have a script which collects all keywords. This is maybe possible from the parser.py file. For the rule params the ruleinfo.py scripyt would be also possible.
As explained issue #15 built-in functions like
expandare not highlighted properly. This can be fixed by integrating the snakemake rules in the MagicPython grammar. In my fork of this repo, I could implement this by copying and modifying the whole MagicPython grammar. Unfortunately, I did not find a way to just use theincluderule key to load the MagicPython grammar and overwrite the rules that I wanted to include the sankemake rules in.