snakemake snakemake-storage-plugin-fs issues

snakemake / snakemake-storage-plugin-fs

A Snakemake storage plugin that reads and writes from a locally mounted filesystem using rsync.

MIT License

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issues

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Possible bug with slurm and storage fs plugin for local keyword

#24 raphaelbetschart opened 1 week ago
0
How to combine param paths with a fs storage

#23 IceFreez3r opened 1 week ago
0
`remote-job-local-storage-prefix` gets parsed in local context

#22 IceFreez3r opened 1 week ago
0
chore(main): release 1.0.5

#21 github-actions[bot] closed 3 weeks ago
1
fix: fix touch and retrieval of mtime for directories

#20 johanneskoester closed 3 weeks ago
0
'fs' gets a literal place in the path string

#19 cmeesters opened 1 month ago
8
chore(main): release 1.0.4

#18 github-actions[bot] closed 3 months ago
1
chore(main): release 1.0.3

#17 github-actions[bot] closed 3 months ago
1
chore(main): release 1.0.2

#16 github-actions[bot] closed 3 months ago
1
chore(main): release 1.0.1

#15 github-actions[bot] closed 3 months ago
1
wrong path mapping

#14 cmeesters closed 3 months ago
5
fix!: remove latency wait support as this should rather be handled in main Snakemake (as it is already done). The reason is that the plugin cannot distinguish between cases where latency has to be taken into accound and where not, leading to overall much slower processing when latency wait is applied regardless of the context. This introduces a breaking change because this plugin now does not offer any settings anymore.

#13 johanneskoester closed 5 months ago
1
chore(main): release 1.0.0

#12 github-actions[bot] closed 5 months ago
1
fix: respect permissions of the target dir, especially setgid

#11 johanneskoester closed 5 months ago
0
chore(main): release 0.2.0

#10 github-actions[bot] closed 5 months ago
1
feat: add touch support

#9 johanneskoester closed 5 months ago
0
feat: provide setting for latency wait

#8 johanneskoester closed 5 months ago
0
unsure usage

#7 cmeesters closed 5 months ago
8
chore(main): release 0.1.5

#6 github-actions[bot] closed 7 months ago
1
chore(main): release 0.1.4

#5 github-actions[bot] closed 7 months ago
1
chore(main): release 0.1.3

#4 github-actions[bot] closed 7 months ago
1
chore(main): release 0.1.2

#3 github-actions[bot] closed 8 months ago
1
chore(main): release 0.1.1

#2 github-actions[bot] closed 8 months ago
1
chore(main): release 0.1.0

#1 github-actions[bot] closed 8 months ago
1