snap-stanford / SATURN

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Please help with GSE113074_Corrected_combined.annotated_counts.h5ad #38

Closed bitcometz closed 8 months ago

bitcometz commented 8 months ago

hello, I follow this toturial to generate the "Please help with GSE113074_Corrected_combined.annotated_counts.h5ad" file. I ran the code but I got very small file: image

Could you help with my problem? Thanks very much !!!

Here is my notebook: https://drive.google.com/file/d/1ktpPNGP0nvQl8rE6JuXWNUyofxyEDlsO/view?usp=sharing

bitcometz commented 8 months ago

The issue is likely due to insufficient computational cluster resources on our end.