snap-stanford / SATURN

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STOP: TOTAL NO. of ITERATIONS REACHED LIMIT. #77

Open Quianter opened 3 days ago

Quianter commented 3 days ago

Hi: SATURN's programmer when i run train-saturn.py to integrate my cross-species scRNA dataset, I met a error message that doesn't stop the whole program: "PRETRAIN SCORES

------Log Reg Scores----- /PATH/TO/MY/sklearn/linear_model/_logistic.py:444: ConvergenceWarning: lbfgs failed to converge (status=1): STOP: TOTAL NO. of ITERATIONS REACHED LIMIT." And, it looks like a failure when get_all_scores script tried to convergent, how can i improve the ITERATIONS number by adjust the default parameter, like --polling_freq or --pretrain_epochs?