Analysis pipeline for CUT&RUN Data. Currently configured for use in the McKay Lab at UNC, but extensible elsewhere by changing configuration files.
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Make sampleSheet & poolSampleSheet outputs within a rule #16
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snystrom opened 4 years ago
May be better to create these files as the final step of the pipeline instead of by predicting outputs & duplicating code.
Use this to make "NA" for files (like peak calls) which aren't created because not enough reads to succeed?