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soedinglab
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metaeuk
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
GNU General Public License v3.0
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[Feature request] Add option to exclude symlink creation for temporary files (for easy use with AWS S3)
#93
jolespin
opened
1 day ago
2
How can i annotate my eukaryotic MAGs by metaeuk?
#92
YoungerRen
opened
3 weeks ago
3
Cannot write fas.0, unitesetstofasta step died
#91
katharinedickson
opened
1 month ago
9
[Feature Request] If amino acid input is detected. Exit with non-zero error code.
#90
jolespin
opened
3 months ago
0
[Question] Advice on setting up MetaEuk for 140 genomes?
#89
jolespin
closed
5 months ago
1
Error using `--add-orf-stop`
#88
berkelem
closed
5 months ago
5
Settings to produce a convertalis table to output a blast outfm6 table.
#87
JoshuaTCooper
opened
8 months ago
1
bundles for release tagged 6-a5d39d9 self-report version as fba1b3d5a6009a46968734adca0ff15ac98bb732
#86
douglasgscofield
opened
8 months ago
0
Build fails on some architectures: ld: error: undefined symbol: roundevenf
#85
yurivict
closed
8 months ago
12
Metaeuk: GITDIR-NOTFOUND
#84
ReemaSingh
opened
11 months ago
1
Can metaeuk enforce splice site checking?
#83
melop
opened
1 year ago
2
"tmp" directory does not automatically remove
#82
Zjianglin
opened
1 year ago
2
Your opinion on Miniprot
#81
shelkmike
opened
1 year ago
4
`export OMP_NUM_THREADS=1; metaeuk easy-predict --threads 1` still fails with `libgomp: Thread creation failed: Resource temporarily unavailable` for users where linux's `nproc` limit is set
#80
mickeykawai
closed
1 year ago
6
easypredict.sh error 13 (Permission denied)
#79
laxeye
closed
1 year ago
2
[Question] Can MetaEuk utilize the MMSEQS2 clustering results?
#78
jolespin
opened
1 year ago
2
Not support very long chromosomes?
#77
zhangrengang
opened
1 year ago
8
Not support very long chromosomes?
#76
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#75
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#74
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#73
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#72
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#71
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#70
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#69
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#68
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#67
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#66
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#65
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#64
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#63
zhangrengang
closed
1 year ago
1
Not support the very long chromosomes?
#62
zhangrengang
closed
1 year ago
1
Not support very long chromosomes?
#61
zhangrengang
closed
1 year ago
1
Update EasyPredict.cpp
#60
ejrsimr
closed
1 year ago
2
[Question] What are the recommended parameters to adjust for decreasing memory requirements?
#59
jolespin
closed
1 year ago
4
Annotation of recent assembly genome using MetaEuk
#58
BenAawf
opened
1 year ago
1
fix spelling issues
#57
satta
closed
1 year ago
6
Running easy-predict with profiles and multiple iterations does not work
#56
olekto
closed
1 year ago
3
Fails to build where OpenMP isn't available when -DREQUIRE_OPENMP=0 is set
#55
yurivict
opened
1 year ago
0
threads of metaeuk
#54
Fang-Liu-CAS
closed
1 year ago
2
Empty output files.
#53
DanieleDeco
closed
1 year ago
7
Split big CDS to subCDS using gff
#52
ucabuk
opened
1 year ago
1
Calculation of alignments step died
#51
AlexSongh
opened
2 years ago
10
Does MetaEuk provide official test cases?
#50
YFLEEL
closed
1 year ago
16
[Question] How to estimate memory usage?
#49
jolespin
opened
2 years ago
1
compile from source have some problems
#48
jamdodot
opened
2 years ago
24
unitesetstofasta error: There should be 19 columns in the input file
#47
mgabriell1
closed
2 years ago
2
How can I use metaeuk to annotation genome without reference
#46
Nana7m1
opened
2 years ago
4
Error in MetaEuk during BUSCO run
#45
berkelem
opened
2 years ago
4
Multiple round of metaeuk
#44
xiekunwhy
opened
2 years ago
1
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