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soedinglab
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prosstt
PRObabilistic Simulations of ScRNA-seq Tree-like Topologies
http://dx.doi.org/10.1093/bioinformatics/btz078
GNU General Public License v3.0
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simulating bulk data
#16
galicae
opened
9 months ago
0
edge case handling
#15
galicae
opened
9 months ago
0
A small change to fix newer numpy error
#14
Jabbath
closed
9 months ago
1
Which version of scanpy and anndata should i use?
#13
kunwang34
closed
3 years ago
4
Estimating PROSSTT parameters
#12
lazappi
closed
5 years ago
4
changes for PROSSTT review
#11
galicae
closed
5 years ago
0
fast-forwarding dev to master
#10
galicae
closed
6 years ago
0
overdispersion
#9
koenvandenberge
closed
6 years ago
7
updated documentation to stress how topology definition works
#8
galicae
closed
6 years ago
0
merged pull request from Scott Gigante
#7
galicae
closed
6 years ago
0
Simulating tree from newick: the parameters are not enough for [n] branches
#6
scottgigante
closed
6 years ago
5
Simulate gene dropout with PROSSTT
#5
scottgigante
closed
6 years ago
3
Add simple pip install, newick dependency and fix minimal example imports
#4
scottgigante
closed
6 years ago
6
updating PROSSTT to version 1.1
#3
galicae
closed
6 years ago
0
merge actual final state of dev
#2
galicae
closed
6 years ago
0
merge of dev branch
#1
galicae
closed
6 years ago
0