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soh-i
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Ivy
Detection method for RNA editng sites based on high-throughput sequencing data
GNU General Public License v2.0
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Travis-CIをちゃんと動くようにする
#81
soh-i
opened
10 years ago
0
List of need for refactoring implement points
#80
soh-i
opened
10 years ago
0
Serious bug found in conversion of strand
#79
soh-i
closed
10 years ago
3
KeyError: 'chrM' due to opening bam file
#78
soh-i
opened
10 years ago
0
Dot not work to consider strand of transcripts when the loci has multiple alleles
#77
soh-i
closed
10 years ago
0
速度のベンチマークと各メソッドのボトルネックを探す
#76
soh-i
opened
10 years ago
5
IOError when retrieve splited fasta files name
#75
soh-i
closed
10 years ago
0
bamとfastaの染色体名が違う場合の処理
#74
soh-i
opened
10 years ago
0
D. melanogasterのRNA-seqデータの解析 (Single-end readsへの対応)
#73
soh-i
closed
10 years ago
7
decode_chr_name_from_fileのbug fix
#72
soh-i
closed
10 years ago
0
Support spliced reads to FilterAlignmeReadGenerator#*_filter methods
#71
soh-i
closed
10 years ago
0
DP4のバグ
#70
soh-i
closed
10 years ago
0
Bug for `AlignmentReadsStats.define_allele(base, ref=None)`
#69
soh-i
closed
10 years ago
3
Pileup時における塩基のバグ?
#68
soh-i
closed
10 years ago
5
worker毎の結果をマージする
#67
soh-i
closed
10 years ago
1
特定の染色体へのMapping ratioが0のときのエラー
#66
soh-i
closed
10 years ago
1
並列時にWorkerが1つしか立ち上がらない
#65
soh-i
closed
10 years ago
1
並列時におけるバグ
#64
soh-i
closed
10 years ago
1
AttriDicの構造化
#63
soh-i
opened
10 years ago
0
並列化への対応
#62
soh-i
closed
10 years ago
1
ドキュメントを何とかして書く
#61
soh-i
opened
10 years ago
0
実データを使ってRNA editingサイトの検出を行う
#60
soh-i
opened
10 years ago
0
RNA-seqとDNA-seqの両方が与えられた場合の動作確認
#59
soh-i
opened
10 years ago
0
dbSNP filterの実装
#58
soh-i
opened
10 years ago
0
positional bias filterの実装
#57
soh-i
opened
10 years ago
1
Base call biasの実装
#56
soh-i
opened
10 years ago
0
PileupError at chr:21, pos:47724647, ref:T
#55
soh-i
closed
10 years ago
1
shutoku
#54
soh-i
opened
10 years ago
0
`AlignmentStream` classの再設計
#53
soh-i
closed
10 years ago
1
(matplotlib|C|C++|numpy)非依存でplotをできるライブラリを探す
#52
soh-i
opened
10 years ago
0
tox使って異なるpythonでのテストを自動化する
#51
soh-i
opened
10 years ago
0
Install Ivy with setup.py
#50
soh-i
closed
10 years ago
1
Fasta fileの読み込みを並列化
#49
soh-i
closed
10 years ago
2
Fasta fileno
#48
soh-i
closed
10 years ago
0
Error occurred at pysam with multiprocessing
#47
soh-i
closed
10 years ago
0
To abstract parsing command line options
#46
soh-i
closed
10 years ago
1
run_benchmarking.pyの抽象化
#45
soh-i
closed
10 years ago
1
Ivy.run()の実装について
#44
soh-i
closed
10 years ago
0
統計検定の方法の実装
#43
soh-i
closed
10 years ago
0
Designing for exception class
#42
soh-i
closed
10 years ago
0
Create Darned DB caches
#41
soh-i
opened
10 years ago
0
benchmak.*以下のクラスのドキュメントを書く
#40
soh-i
closed
10 years ago
0
忘年会
#39
soh-i
opened
10 years ago
2
Change file descriptor to STDERR when error occured
#38
soh-i
opened
10 years ago
1
Refactor for printing vcf files
#37
soh-i
closed
10 years ago
0
DP4の計算
#36
soh-i
closed
10 years ago
0
Optionの実装状況
#35
soh-i
opened
10 years ago
1
Implement BLAT filter to realign to remove multiple location hit reads
#34
soh-i
opened
10 years ago
0
並列化
#33
soh-i
closed
10 years ago
6
--confirm-darned option
#32
soh-i
opened
10 years ago
0
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