soorajachar / plateypus

Processes and plots high throughput cytometry experiments through a GUI
GNU General Public License v3.0
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PLATEypusLogo

A GUI to process and plot high throughput bulk cytokine, surface marker, and single cell data exported from Flowjo

Main powerpoint tutorial for GUI is hosted on google drive:
https://drive.google.com/file/d/1jt8ZlOiArbiVK-RyF1_rrS8swEYsqWae/view?usp=sharing

To use this package:

  1. If anaconda is not installed, follow installation instructions here: https://docs.anaconda.com/anaconda/install/
  2. Start terminal, type in and enter:
    conda activate
  3. Now install plateypus via PyPi by typing the following line in the terminal:
    pip install plateypus
  4. In this anaconda environment, type:
    python3 -m plateypus

    to start the GUI