jcohenadad
commented
5 months ago This addresses the issue:
!openneuro-py download --dataset ds005025 --target-dir data/But then I run into:
👋 Hello! This is openneuro-py 2024.2.0. Great to see you! 🤗
👉 Please report problems 🤯 and bugs 🪲 at
https://github.com/hoechenberger/openneuro-py/issues
🌍 Preparing to download ds005025 …
GraphQL query failed with 1 errors
╭───────────────────── Traceback (most recent call last) ──────────────────────╮
│ /Users/julien/miniconda3/lib/python3.10/site-packages/openneuro/_download.py │
│ :217 in _get_download_metadata │
│ │
│ 214 │ │ │ if msg == "You do not have access to read this dataset.": │
│ 215 │ │ │ │ try: │
│ 216 │ │ │ │ │ # Do we have an API token? │
│ ❱ 217 │ │ │ │ │ get_token() │
│ 218 │ │ │ │ │ raise RuntimeError( │
│ 219 │ │ │ │ │ │ "We were not permitted to download " │
│ 220 │ │ │ │ │ │ "this dataset. Perhaps your user " │
│ │
│ ╭───────────────────────────────── locals ─────────────────────────────────╮ │
│ │ base_url = 'https://openneuro.org/' │ │
│ │ check_snapshot = True │ │
│ │ dataset_id = 'ds005025' │ │
│ │ max_retries = 5 │ │
│ │ msg = 'You do not have access to read this dataset.' │ │
│ │ query = '\n query {\n dataset(id: "ds005025") {\n │ │
│ │ latestSnapshot {\n '+219 │ │
│ │ request_timed_out = False │ │
│ │ response_json = { │ │
│ │ │ 'errors': [ │ │
│ │ │ │ { │ │
│ │ │ │ │ 'message': 'You do not have access to │ │
│ │ read this dataset.', │ │
│ │ │ │ │ 'locations': [ │ │
│ │ │ │ │ │ {'line': 3, 'column': 9} │ │
│ │ │ │ │ ], │ │
│ │ │ │ │ 'path': ['dataset'], │ │
│ │ │ │ │ 'extensions': { │ │
│ │ │ │ │ │ 'code': 'INTERNAL_SERVER_ERROR', │ │
│ │ │ │ │ │ 'stacktrace': [ │ │
│ │ │ │ │ │ │ 'Error: You do not have access │ │
│ │ to read this dataset.', │ │
│ │ │ │ │ │ │ ' at checkDatasetRead │ │
│ │ (/srv/packages/openneuro-server/dist/graphql/permis… │ │
│ │ │ │ │ │ │ ' at │ │
│ │ process.processTicksAndRejections │ │
│ │ (node:internal/process/task_queues:95:5'+1, │ │
│ │ │ │ │ │ │ ' at async dataset │ │
│ │ (/srv/packages/openneuro-server/dist/graphql/resolv… │ │
│ │ │ │ │ │ ] │ │
│ │ │ │ │ } │ │
│ │ │ │ } │ │
│ │ │ ], │ │
│ │ │ 'data': {'dataset': None}, │ │
│ │ │ 'extensions': { │ │
│ │ │ │ 'openneuro': {'version': '4.22.0'} │ │
│ │ │ } │ │
│ │ } │ │
│ │ retry_backoff = 0.5 │ │
│ │ tag = None │ │
│ │ tree = 'null' │ │
│ ╰──────────────────────────────────────────────────────────────────────────╯ │
│ │
│ /Users/julien/miniconda3/lib/python3.10/site-packages/openneuro/_config.py:7 │
│ 2 in get_token │
│ │
│ 69 │ │
│ 70 │ """ │
│ 71 │ if not CONFIG_PATH.exists(): │
│ ❱ 72 │ │ raise ValueError( │
│ 73 │ │ │ "Could not read API token as no openneuro-py configuration │
│ 74 │ │ │ 'file exists. Run "openneuro login" to generate it.' │
│ 75 │ │ ) │
╰──────────────────────────────────────────────────────────────────────────────╯
ValueError: Could not read API token as no openneuro-py configuration file
exists. Run "openneuro login" to generate it.
During handling of the above exception, another exception occurred:
╭───────────────────── Traceback (most recent call last) ──────────────────────╮
│ /Users/julien/miniconda3/lib/python3.10/site-packages/openneuro/_cli.py:64 │
│ in download_cli │
│ │
│ 61 │ ] = 5, │
│ 62 ) -> None: │
│ 63 │ """Download datasets from OpenNeuro.""" │
│ ❱ 64 │ download( │
│ 65 │ │ dataset=dataset, │
│ 66 │ │ tag=tag, │
│ 67 │ │ target_dir=target_dir, │
│ │
│ ╭─────────────── locals ────────────────╮ │
│ │ dataset = 'ds005025' │ │
│ │ exclude = None │ │
│ │ include = None │ │
│ │ max_concurrent_downloads = 5 │ │
│ │ max_retries = 5 │ │
│ │ tag = None │ │
│ │ target_dir = 'data/' │ │
│ │ verify_hash = True │ │
│ │ verify_size = True │ │
│ ╰───────────────────────────────────────╯ │
│ │
│ /Users/julien/miniconda3/lib/python3.10/site-packages/openneuro/_download.py │
│ :791 in download │
│ │
│ 788 │ exclude = [] if exclude is None else list(exclude) │
│ 789 │ │
│ 790 │ retry_backoff = 0.5 # seconds │
│ ❱ 791 │ metadata = _get_download_metadata( │
│ 792 │ │ dataset_id=dataset, │
│ 793 │ │ tag=tag, │
│ 794 │ │ max_retries=max_retries, │
│ │
│ ╭───────────────────────────────── locals ─────────────────────────────────╮ │
│ │ dataset = 'ds005025' │ │
│ │ exclude = [] │ │
│ │ include = [] │ │
│ │ max_concurrent_downloads = 5 │ │
│ │ max_retries = 5 │ │
│ │ msg = '\n👋 Hello! This is openneuro-py 2024.2.0. │ │
│ │ Great to see you! 🤗\n\n 👉 Please │ │
│ │ report'+85 │ │
│ │ msg_bugs = 'bugs 🪲' │ │
│ │ msg_great_to_see_you = 'Great to see you! 🤗' │ │
│ │ msg_hello = '👋 Hello!' │ │
│ │ msg_please = '👉 Please' │ │
│ │ msg_problems = 'problems 🤯' │ │
│ │ retry_backoff = 0.5 │ │
│ │ tag = None │ │
│ │ target_dir = PosixPath('/Users/julien/code/coil-qc-code/d… │ │
│ │ verify_hash = True │ │
│ │ verify_size = True │ │
│ ╰──────────────────────────────────────────────────────────────────────────╯ │
│ │
│ /Users/julien/miniconda3/lib/python3.10/site-packages/openneuro/_download.py │
│ :226 in _get_download_metadata │
│ │
│ 223 │ │ │ │ │ ) │
│ 224 │ │ │ │ except ValueError as e: │
│ 225 │ │ │ │ │ # We don't have an API token. │
│ ❱ 226 │ │ │ │ │ raise RuntimeError( │
│ 227 │ │ │ │ │ │ "It seems that this is a restricted " │
│ 228 │ │ │ │ │ │ "dataset. However, your API token is " │
│ 229 │ │ │ │ │ │ "not configured properly, so we could " │
│ │
│ ╭───────────────────────────────── locals ─────────────────────────────────╮ │
│ │ base_url = 'https://openneuro.org/' │ │
│ │ check_snapshot = True │ │
│ │ dataset_id = 'ds005025' │ │
│ │ max_retries = 5 │ │
│ │ msg = 'You do not have access to read this dataset.' │ │
│ │ query = '\n query {\n dataset(id: "ds005025") {\n │ │
│ │ latestSnapshot {\n '+219 │ │
│ │ request_timed_out = False │ │
│ │ response_json = { │ │
│ │ │ 'errors': [ │ │
│ │ │ │ { │ │
│ │ │ │ │ 'message': 'You do not have access to │ │
│ │ read this dataset.', │ │
│ │ │ │ │ 'locations': [ │ │
│ │ │ │ │ │ {'line': 3, 'column': 9} │ │
│ │ │ │ │ ], │ │
│ │ │ │ │ 'path': ['dataset'], │ │
│ │ │ │ │ 'extensions': { │ │
│ │ │ │ │ │ 'code': 'INTERNAL_SERVER_ERROR', │ │
│ │ │ │ │ │ 'stacktrace': [ │ │
│ │ │ │ │ │ │ 'Error: You do not have access │ │
│ │ to read this dataset.', │ │
│ │ │ │ │ │ │ ' at checkDatasetRead │ │
│ │ (/srv/packages/openneuro-server/dist/graphql/permis… │ │
│ │ │ │ │ │ │ ' at │ │
│ │ process.processTicksAndRejections │ │
│ │ (node:internal/process/task_queues:95:5'+1, │ │
│ │ │ │ │ │ │ ' at async dataset │ │
│ │ (/srv/packages/openneuro-server/dist/graphql/resolv… │ │
│ │ │ │ │ │ ] │ │
│ │ │ │ │ } │ │
│ │ │ │ } │ │
│ │ │ ], │ │
│ │ │ 'data': {'dataset': None}, │ │
│ │ │ 'extensions': { │ │
│ │ │ │ 'openneuro': {'version': '4.22.0'} │ │
│ │ │ } │ │
│ │ } │ │
│ │ retry_backoff = 0.5 │ │
│ │ tag = None │ │
│ │ tree = 'null' │ │
│ ╰──────────────────────────────────────────────────────────────────────────╯ │
╰──────────────────────────────────────────────────────────────────────────────╯
RuntimeError: It seems that this is a restricted dataset. However, your API
token is not configured properly, so we could not log you in. Could not read API
token as no openneuro-py configuration file exists. Run "openneuro login" to
generate it.Which is related to the login configuration.
Getting this:
@Kyota-exe @evaalonsoortiz does it work on your end?
I'm running this version: