Unified labels to only use that on TFLTB1 image

spinal-cord-7t / coil-qc-code

7T Spinal Cord Coil QC Analysis Code

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Unified labels to only use that on TFLTB1 image #90

Open jcohenadad opened 1 week ago

jcohenadad commented 1 week ago

Work in progress-- remaining issue with processing of MSSM

Fixes #87

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jcohenadad commented 1 week ago

Issue to fix:


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Spinal Cord Toolbox (git-master-9e1f65b86902cb237d5f79058a4623eed2d2c8eb)

sct_extract_metric -i sub-MSSM_DREAMTB1avgB1map_reg.nii.gz -f ../../sub-CRMBM/fmap/sub-CRMBM_DREAMTB1avgB1map_mask.nii.gz -method wa -z 14:62 -perslice 1 -o /Users/julien/code/coil-qc-code/data-phantom/derivatives/results/sub-MSSM_DREAMTB1avgB1map.csv
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Load metric image...

ERROR: Metric data and labels DO NOT HAVE SAME DIMENSIONS.