Issue with Spring Data Neo4j migration from 2.3.3 to 3.0.0.RELEASE [DATAGRAPH-442]

[spring-projects-issues]

Remigio Di Muzio opened DATAGRAPH-442 and commented

I'm trying to migrate an SDN project from the 2.3.3 version to the 3.0.0.RELEASE. The project is a WAR which is deployed on a Glassfish 3.1.2.2 server and uses EJBs which access Neo4j via an @Autowired Neo4jOperations object and GraphRepository objects. The auto wiring is supported using the SpringBeanAutowiringInterceptor interceptor annotation on the EJBs. The SDN configuration is given by the following lines in the spring xml configuration file:

\<bean id="graphDatabaseService" class="org.springframework.data.neo4j.support.GraphDatabaseServiceFactoryBean" destroy-method="shutdown" scope="singleton"> \ \ \ \ \

Everything works fine when using the 2.3.3 SDN version, whereas 3.0.0 gives the following error while deploying:

javax.enterprise.inject.UnsatisfiedResolutionException: Unable to resolve a bean for 'org.springframework.data.neo4j.support.mapping.Neo4jMappingContext' with qualifiers [@javax.enterprise.inject.Any(),

@javax.enterprise.inject.Default()]. at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.createRepositoryBean(Neo4jCdiRepositoryExtension.java:107) at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.afterBeanDiscovery(Neo4jCdiRepositoryExtension.java:82) ...

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Affects: 3.0 GA (Codd)

Reference URL: http://stackoverflow.com/questions/21783816/issue-with-spring-data-neo4j-migration-from-2-3-3-to-3-0-0-rc1

[spring-projects-issues]

Michael Hunger commented

Can you share the full stack trace?

Sorry I haven't gotten around writing about migration, that's on our todo list. In General don't try to use 3.0.0 in production just for eval and feedback, we're working on 3.0.1 which will add some needed features.

Make sure to add a base-package attribute to neo4j:config and try again.

[spring-projects-issues]

Remigio Di Muzio commented

Thanks a lot for your help Michael. I'm just playing with 3.0.0, still using 2.3.3 in production. This is the whole error stack, no changes after modifying the neo4j:config attribute:

SEVERE: Exception while loading the app SEVERE: Exception while loading the app : Exception List with 1 exceptions: Exception 0 : javax.enterprise.inject.UnsatisfiedResolutionException: Unable to resolve a bean for 'org.springframework.data.neo4j.support.mapping.Neo4jMappingContext' with qualifiers [@javax.enterprise.inject.Any(), @javax.enterprise.inject.Default()]. at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.createRepositoryBean(Neo4jCdiRepositoryExtension.java:107) at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.afterBeanDiscovery(Neo4jCdiRepositoryExtension.java:82) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.jboss.weld.util.reflection.SecureReflections$13.work(SecureReflections.java:267) at org.jboss.weld.util.reflection.SecureReflectionAccess.run(SecureReflectionAccess.java:52) at org.jboss.weld.util.reflection.SecureReflectionAccess.runAsInvocation(SecureReflectionAccess.java:137) at org.jboss.weld.util.reflection.SecureReflections.invoke(SecureReflections.java:263) at org.jboss.weld.introspector.jlr.WeldMethodImpl.invokeOnInstance(WeldMethodImpl.java:170) at org.jboss.weld.introspector.ForwardingWeldMethod.invokeOnInstance(ForwardingWeldMethod.java:51) at org.jboss.weld.injection.MethodInjectionPoint.invokeOnInstanceWithSpecialValue(MethodInjectionPoint.java:154) at org.jboss.weld.event.ObserverMethodImpl.sendEvent(ObserverMethodImpl.java:245) at org.jboss.weld.event.ObserverMethodImpl.sendEvent(ObserverMethodImpl.java:233) at org.jboss.weld.event.ObserverMethodImpl.notify(ObserverMethodImpl.java:213) at org.jboss.weld.bootstrap.events.AbstractContainerEvent.fire(AbstractContainerEvent.java:75) at org.jboss.weld.bootstrap.events.AbstractDefinitionContainerEvent.fire(AbstractDefinitionContainerEvent.java:46) at org.jboss.weld.bootstrap.events.AfterBeanDiscoveryImpl.fire(AfterBeanDiscoveryImpl.java:40) at org.jboss.weld.bootstrap.WeldBootstrap.deployBeans(WeldBootstrap.java:360) at org.glassfish.weld.WeldDeployer.event(WeldDeployer.java:179) at org.glassfish.kernel.event.EventsImpl.send(EventsImpl.java:128) at org.glassfish.internal.data.ApplicationInfo.load(ApplicationInfo.java:277) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:460) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:240) at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:389) at com.sun.enterprise.v3.admin.CommandRunnerImpl$1.execute(CommandRunnerImpl.java:348) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:363) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1085) at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1200(CommandRunnerImpl.java:95) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1291) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1259) at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:461) at com.sun.enterprise.v3.admin.AdminAdapter.service(AdminAdapter.java:212) at com.sun.grizzly.tcp.http11.GrizzlyAdapter.service(GrizzlyAdapter.java:179) at com.sun.enterprise.v3.server.HK2Dispatcher.dispath(HK2Dispatcher.java:117) at com.sun.enterprise.v3.services.impl.ContainerMapper$Hk2DispatcherCallable.call(ContainerMapper.java:354) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:195) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:860) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:757) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1056) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:229) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:744) org.jboss.weld.exceptions.DefinitionException: Exception List with 1 exceptions: Exception 0 : javax.enterprise.inject.UnsatisfiedResolutionException: Unable to resolve a bean for 'org.springframework.data.neo4j.support.mapping.Neo4jMappingContext' with qualifiers [@javax.enterprise.inject.Any(), @javax.enterprise.inject.Default()]. at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.createRepositoryBean(Neo4jCdiRepositoryExtension.java:107) at org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension.afterBeanDiscovery(Neo4jCdiRepositoryExtension.java:82) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:606) at org.jboss.weld.util.reflection.SecureReflections$13.work(SecureReflections.java:267) at org.jboss.weld.util.reflection.SecureReflectionAccess.run(SecureReflectionAccess.java:52) at org.jboss.weld.util.reflection.SecureReflectionAccess.runAsInvocation(SecureReflectionAccess.java:137) at org.jboss.weld.util.reflection.SecureReflections.invoke(SecureReflections.java:263) at org.jboss.weld.introspector.jlr.WeldMethodImpl.invokeOnInstance(WeldMethodImpl.java:170) at org.jboss.weld.introspector.ForwardingWeldMethod.invokeOnInstance(ForwardingWeldMethod.java:51) at org.jboss.weld.injection.MethodInjectionPoint.invokeOnInstanceWithSpecialValue(MethodInjectionPoint.java:154) at org.jboss.weld.event.ObserverMethodImpl.sendEvent(ObserverMethodImpl.java:245) at org.jboss.weld.event.ObserverMethodImpl.sendEvent(ObserverMethodImpl.java:233) at org.jboss.weld.event.ObserverMethodImpl.notify(ObserverMethodImpl.java:213) at org.jboss.weld.bootstrap.events.AbstractContainerEvent.fire(AbstractContainerEvent.java:75) at org.jboss.weld.bootstrap.events.AbstractDefinitionContainerEvent.fire(AbstractDefinitionContainerEvent.java:46) at org.jboss.weld.bootstrap.events.AfterBeanDiscoveryImpl.fire(AfterBeanDiscoveryImpl.java:40) at org.jboss.weld.bootstrap.WeldBootstrap.deployBeans(WeldBootstrap.java:360) at org.glassfish.weld.WeldDeployer.event(WeldDeployer.java:179) at org.glassfish.kernel.event.EventsImpl.send(EventsImpl.java:128) at org.glassfish.internal.data.ApplicationInfo.load(ApplicationInfo.java:277) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:460) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:240) at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:389) at com.sun.enterprise.v3.admin.CommandRunnerImpl$1.execute(CommandRunnerImpl.java:348) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:363) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1085) at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1200(CommandRunnerImpl.java:95) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1291) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1259) at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:461) at com.sun.enterprise.v3.admin.AdminAdapter.service(AdminAdapter.java:212) at com.sun.grizzly.tcp.http11.GrizzlyAdapter.service(GrizzlyAdapter.java:179) at com.sun.enterprise.v3.server.HK2Dispatcher.dispath(HK2Dispatcher.java:117) at com.sun.enterprise.v3.services.impl.ContainerMapper$Hk2DispatcherCallable.call(ContainerMapper.java:354) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:195) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:860) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:757) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1056) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:229) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:744) at org.jboss.weld.bootstrap.events.AbstractDefinitionContainerEvent.fire(AbstractDefinitionContainerEvent.java:48) at org.jboss.weld.bootstrap.events.AfterBeanDiscoveryImpl.fire(AfterBeanDiscoveryImpl.java:40) at org.jboss.weld.bootstrap.WeldBootstrap.deployBeans(WeldBootstrap.java:360) at org.glassfish.weld.WeldDeployer.event(WeldDeployer.java:179) at org.glassfish.kernel.event.EventsImpl.send(EventsImpl.java:128) at org.glassfish.internal.data.ApplicationInfo.load(ApplicationInfo.java:277) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:460) at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:240) at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:389) at com.sun.enterprise.v3.admin.CommandRunnerImpl$1.execute(CommandRunnerImpl.java:348) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:363) at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1085) at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1200(CommandRunnerImpl.java:95) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1291) at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1259) at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:461) at com.sun.enterprise.v3.admin.AdminAdapter.service(AdminAdapter.java:212) at com.sun.grizzly.tcp.http11.GrizzlyAdapter.service(GrizzlyAdapter.java:179) at com.sun.enterprise.v3.server.HK2Dispatcher.dispath(HK2Dispatcher.java:117) at com.sun.enterprise.v3.services.impl.ContainerMapper$Hk2DispatcherCallable.call(ContainerMapper.java:354) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:195) at com.sun.grizzly.http.ProcessorTask.invokeAdapter(ProcessorTask.java:860) at com.sun.grizzly.http.ProcessorTask.doProcess(ProcessorTask.java:757) at com.sun.grizzly.http.ProcessorTask.process(ProcessorTask.java:1056) at com.sun.grizzly.http.DefaultProtocolFilter.execute(DefaultProtocolFilter.java:229) at com.sun.grizzly.DefaultProtocolChain.executeProtocolFilter(DefaultProtocolChain.java:137) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:104) at com.sun.grizzly.DefaultProtocolChain.execute(DefaultProtocolChain.java:90) at com.sun.grizzly.http.HttpProtocolChain.execute(HttpProtocolChain.java:79) at com.sun.grizzly.ProtocolChainContextTask.doCall(ProtocolChainContextTask.java:54) at com.sun.grizzly.SelectionKeyContextTask.call(SelectionKeyContextTask.java:59) at com.sun.grizzly.ContextTask.run(ContextTask.java:71) at com.sun.grizzly.util.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:532) at com.sun.grizzly.util.AbstractThreadPool$Worker.run(AbstractThreadPool.java:513) at java.lang.Thread.run(Thread.java:744)

[spring-projects-issues]

Remigio Di Muzio commented

I've discovered where the issue comes from after examining the code of the org.springframework.data.neo4j.repository.cdi.Neo4jCdiRepositoryExtension class. Putting a breakpoint at line 76 in afterBeanDiscovery method, I've seen that at that point during the execution the graphDatabases map is still empty; that means at that point the graphDatabase is not created yet. Simply commenting out the whole afterBeanDiscovery method makes everything work. Of course this workaround completely compromises use of CDI. I'm not able to solve the bug but I hope this can help SDN developers to work on it

[spring-projects-issues]

Remigio Di Muzio commented

Getting a bit deeper in the CDI implementation I've definitely solved the issue. The graphDatabase object is never discovered for two reasons:

1. in the META-INF folder of SDN there is no beans.xml file and this prevents Java EE from starting bean discovery;
2. the DelegatingGraphDatabase has no default constructor and so it's never considered as a bean. I've fixed both issues and now everything works fine.

[spring-projects-issues]

Nicolas Mervaillie commented

I guess this one was resolved by DATAGRAPH-879, and can be closed