issues
search
srnas
/
barnaba
Analyse Nucleic Acids Structure and Simulations with baRNAba
GNU General Public License v3.0
38
stars
15
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Raise exceptions instead of sys.exit
#62
ollyfutur
opened
6 months ago
0
how to plot svg files from out file ( barnaba SEC_STRUCTURE Command )
#61
vas2201
opened
10 months ago
1
Recovering backbone connections
#60
cgoliver
opened
1 year ago
0
Correspondence between PDB chain/residue identifiers and `bb.annotate()` output
#59
cgoliver
opened
1 year ago
0
Barnaba usage for kink-turns in Python with custom pdb files
#58
theoboury
opened
1 year ago
0
Test scikit learn
#57
GiovanniBussi
closed
1 year ago
0
Use scikit-learn instead of sklearn
#56
niz-ka
closed
1 year ago
0
Add CodeQL workflow for GitHub code scanning
#55
lgtm-com[bot]
opened
1 year ago
0
Add cutoff option for base stacking and pairing annotation
#54
kntkb
closed
1 year ago
4
git+https://github.com/scipy/scipy.git
#53
cclauss
closed
2 years ago
0
[Question] Threshold used to define base stacking
#52
kntkb
closed
1 year ago
1
Test on Python 3.11
#51
cclauss
closed
9 months ago
1
Upgrade GitHub Actions
#50
cclauss
closed
2 years ago
0
Change versioning system
#49
GiovanniBussi
closed
2 years ago
0
Added GitHub Actions
#48
GiovanniBussi
closed
2 years ago
1
Installation problem
#47
sreisser
opened
2 years ago
2
Torsion values in case of missing residue
#46
mandar5335
opened
2 years ago
0
Calculating Pseudotorsion angle
#45
mandar5335
closed
2 years ago
3
for RNA Analysis
#44
Ompal12
opened
3 years ago
2
SEC_STRUCTURE problem
#43
LarrySMelidis
opened
3 years ago
1
Modified residues
#42
ghost
opened
4 years ago
2
Update README.rst
#41
GiovanniBussi
closed
4 years ago
0
does not support calculate base-phosphate interaction
#40
zhanghaomiao
opened
5 years ago
0
Allow using barnaba command line from python
#39
GiovanniBussi
closed
5 years ago
1
Fix for python 3
#38
GiovanniBussi
closed
5 years ago
1
Pyemma compatibility
#37
giopina
opened
5 years ago
0
new release
#36
GiovanniBussi
closed
6 years ago
2
Sec struct
#35
sreisser
opened
6 years ago
0
add regtest and examples for secondary structure drawings
#34
sbottaro
opened
6 years ago
0
all-atoms/backbone only RMSD
#33
sbottaro
closed
6 years ago
1
Sec struct
#32
sreisser
closed
6 years ago
5
BUG annotate conversion to dotbracket
#31
sreisser
closed
6 years ago
1
Fluc matrix
#30
giopina
closed
6 years ago
0
Create README.md for test directory
#29
giopina
closed
6 years ago
0
Include command-line interface in python library
#28
GiovanniBussi
closed
5 years ago
1
Export modes from command line
#27
GiovanniBussi
closed
6 years ago
0
Fixes in README
#26
GiovanniBussi
closed
6 years ago
0
ENM example does not work
#25
sbottaro
closed
6 years ago
2
Fixing the ENM tests
#24
giopina
closed
6 years ago
0
create readme for testing
#23
giopina
closed
6 years ago
0
ENM Travis Fail
#22
sbottaro
closed
6 years ago
1
ENM example
#21
giopina
closed
6 years ago
0
these packages are on pip as well
#20
GiovanniBussi
closed
6 years ago
3
ENM example notebook
#19
giopina
closed
6 years ago
0
setuptools_scm does not work with git archives
#18
GiovanniBussi
closed
6 years ago
4
support mmCIF format
#17
sbottaro
opened
6 years ago
0
output for different pdb models in ANNOTATE
#16
sreisser
opened
6 years ago
0
add test for ENM of RNA+protein
#15
giopina
closed
6 years ago
0
Attempt to install script correctly
#14
GiovanniBussi
closed
6 years ago
5
Possible issue with python3
#13
GiovanniBussi
closed
6 years ago
2
Next