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sstadick
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perbase
Per-base per-nucleotide depth analysis
MIT License
115
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Feature/ref base
#23
sstadick
closed
3 years ago
0
Feature/onlydepth
#22
sstadick
closed
3 years ago
0
Include reference base in `simple-depth`
#21
sstadick
closed
3 years ago
1
Test/per granges
#20
sstadick
closed
3 years ago
0
Improved doc comments and migration to structopt
#19
sstadick
closed
3 years ago
0
Update to using u64 start/stops
#18
sstadick
closed
3 years ago
1
Fix CI to regen / fix lockfile
#17
sstadick
closed
3 years ago
0
Move test bam to tempdir
#16
sstadick
closed
3 years ago
0
Bugfix/multi count regions
#15
sstadick
closed
3 years ago
0
Fix up all the doc comments
#14
sstadick
closed
3 years ago
0
Fix conda build recipe
#13
sstadick
closed
3 years ago
1
Migrate to updated version of rust_lapper
#12
sstadick
closed
3 years ago
0
Look into writing my own pileup engine
#11
sstadick
opened
3 years ago
2
Add bgzip output support
#10
sstadick
closed
3 years ago
4
Add a strictly depth calculator
#9
sstadick
closed
3 years ago
1
Add an `indepth` tool that outputs more metrics
#8
sstadick
opened
3 years ago
0
Switch to using clap
#7
sstadick
closed
3 years ago
0
Add support of readgroup awareness and filtering
#6
sstadick
opened
3 years ago
0
Investigate pre-processing the input bam to annoate mates
#5
sstadick
closed
3 years ago
1
Add tests to `par_io`
#4
sstadick
closed
3 years ago
0
Feature/mate detection
#3
sstadick
closed
3 years ago
0
Add support for specifying regions with a BED file
#2
sstadick
closed
3 years ago
0
Create LICENSE
#1
sstadick
closed
3 years ago
0
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