stanfordmlgroup chexpert-labeler issues

stanfordmlgroup / chexpert-labeler

CheXpert NLP tool to extract observations from radiology reports.

MIT License

349 stars 79 forks source link

issues

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RerankingParser.fetch_and_load('GENIA+PubMed') i cant download the model

#52 Szh2620 opened 3 months ago
0
Probabilities

#51 danielemolino opened 5 months ago
3
Image labeler

#50 GuilhermeJC13 opened 8 months ago
0
About Term Definition and Consistency

#49 wizardlancet opened 11 months ago
0
ERROR::root:Cannot process sentence 39 in 0

#48 zoule41 opened 1 year ago
2
ERROR:Cannot process sentence 0 in 0

#47 giantke opened 1 year ago
4
run label.py ModuleNotFoundError: No module named '_JohnsonReranker'

#46 sherry6247 closed 1 year ago
1
Inexplicable negation mistake

#45 CPBridge opened 1 year ago
0
blank label

#44 xcharxlie opened 1 year ago
1
Cache CoreNLP jar in docker image

#43 jantrienes closed 1 year ago
0
Have stanford-corenlp-3.5.2.jar pre-downloaded in docker image

#42 PabloMessina closed 1 year ago
4
Error, can not found previous push version

#41 holiday01 opened 1 year ago
1
Error - ValueError: Parser model has not been loaded.

#40 njan-creative opened 1 year ago
7
Error encountered on MIMIC：TypeError: 'NoneType' object is not iterable

#39 ThatNight opened 2 years ago
2
Running CheXpert labeler on Google Colab?

#38 PabloMessina opened 2 years ago
4
Out of memory

#37 catfish132 opened 2 years ago
2
Modified Loader to load findings and impression sections

#36 brentd313 closed 2 years ago
8
Unable to run Labeler - invalid package

#35 sm-santomartino opened 2 years ago
1
Running multiple chexpert labelers in parallel

#34 PabloMessina opened 2 years ago
2
Chexpert reports

#33 Allenxq opened 2 years ago
1
Add dockerized runtime

#32 jantrienes closed 3 years ago
0
How to run the labeler on GPU.

#31 ashwanikumar04 closed 3 years ago
3
Issue while installing

#30 ashwanikumar04 closed 3 years ago
1
Results

#29 luantunez opened 3 years ago
4
How to mine more labels

#28 chinmay5 closed 3 years ago
3
gzip: stdout: broken pipeline

#27 TCBpenta8 opened 3 years ago
1
Why is "lesion" not included as a keyword/synonym to lung_lesion finding?

#26 tinahuang222 closed 3 years ago
6
Getting access to the Chexpert reports

#25 saboof opened 4 years ago
4
ValueError: Parser model has not been loaded.

#24 binerone closed 3 years ago
2
What is the programming language used in negation.txt of patterns?

#23 EricFu1120 closed 4 years ago
2
Minor changes to installation procedure

#22 MaxGhenis closed 4 years ago
0
Prerequisite steps also require activating the conda environment

#21 MaxGhenis closed 4 years ago
2
Error installing bllip-parser from environment.yml without gcc and gxx

#20 MaxGhenis closed 4 years ago
1
ResolvePackageNotFound: openssl==1.1.1=h7b6447c_0 (environment.yml)

#19 MaxGhenis closed 4 years ago
0
Document formatting

#18 daikikatsuragawa closed 4 years ago
0
added lemmatizer argument to the call ptb2ud.NegBioPtb2DepConverter i…

#17 akshaysmit closed 4 years ago
2
Fix README as previous NegBio link doesn't work

#16 saahil9jain closed 4 years ago
0
negative construction in clinical report

#15 farrell236 closed 4 years ago
11
cannnot install

#14 kekeke29341 closed 4 years ago
7
rem empty sentences from report before processing

#13 alistairewj closed 5 years ago
0
Rename airspace_opacity.txt to lung_opacity.txt

#12 yfpeng closed 5 years ago
0
convert dicom to jpg

#11 zunzhumu closed 5 years ago
2
What's the meaning of Support Devices?

#10 dobma closed 5 years ago
1
CheXpert-v1.0-small/train.csv missing values

#9 KeremTurgutlu closed 5 years ago
3
Reports require end punctuation

#8 kl2532 opened 5 years ago
1
NegBioPtb2DepConverter constructor update

#7 kl2532 closed 5 years ago
0
Error when running label.py

#6 cbsudux closed 5 years ago
1
Compatibility with NegBio

#5 cshivade closed 5 years ago
4
update with new negbio releases

#4 yfpeng closed 5 years ago
0
Import error with bllipparser/_CharniakParser.so

#3 tobiolatunji closed 5 years ago
6