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statOmics
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satuRn
satuRn is a highly performant and scalable method for performing differential transcript usage analyses.
https://statomics.github.io/satuRn/
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[BUG] Error in locfdr, ML estimation fails
#32
berilerdogdu
closed
9 months ago
6
Recommendation for large.n in filterByExpr
#31
TdzBAS
closed
1 year ago
1
Preprocessing killed
#30
TdzBAS
closed
1 year ago
4
Error fitDTU : Error in if (m == 0) { : missing value where TRUE/FALSE needed
#29
TdzBAS
closed
1 year ago
17
Vignettes
#28
jgilis
closed
1 year ago
0
Vignettes
#27
jgilis
closed
1 year ago
0
Vignettes
#26
jgilis
closed
1 year ago
0
Problems in fitDTU function and usage in SingleCellExperiment class
#25
mcortes-lopez
closed
1 year ago
9
Lowering the memory consumption of `fitDTU.R`
#24
jgilis
closed
1 year ago
0
plotDTU coefficients
#23
jchang97
closed
1 year ago
4
Is it compatible with 10X? Could it work with Seurat object? Should I use alevin/alevin-fry?
#22
Romeo1-1
closed
1 year ago
2
Fix testDTU issue
#21
jgilis
closed
2 years ago
0
[ENHANCEMENT] Do not run empirical correction when too few features
#20
jgilis
closed
1 year ago
1
FDR control and use of raw counts
#19
ChiaraCaprioli
closed
2 years ago
11
Empty levels
#18
jgilis
closed
2 years ago
1
[BUG] Usages of genes with only one isoform
#17
jgilis
closed
2 years ago
1
Issue related to fitDTU .calcVcovUnscaled()
#16
XueyiDong
closed
2 years ago
4
`fitDTU` breaks in presence of unexpressed transcripts
#15
jgilis
closed
3 years ago
1
Use of covariates
#14
antgomo
closed
3 years ago
1
Review
#13
jgilis
closed
3 years ago
0
Review
#12
jgilis
closed
3 years ago
0
Enhancement: report diagnostic elements of the empirical nul correction
#11
jgilis
closed
2 years ago
1
[BUG] Using contrasts with covariates
#10
jackhump
closed
3 years ago
5
[ENHANCEMENT] Update vignette on README and links to more recent version
#9
jackhump
closed
3 years ago
3
R4.1
#8
jgilis
closed
3 years ago
0
Bioc review
#7
jgilis
closed
3 years ago
0
comply git checks (#1)
#6
jgilis
closed
3 years ago
0
Bioc prepare
#5
jgilis
closed
3 years ago
0
Dexseq
#4
jgilis
closed
3 years ago
0
Put dexseq equal to master
#3
jgilis
closed
3 years ago
0
Jgilis test
#2
jgilis
closed
3 years ago
0
update news and citation
#1
jgilis
closed
3 years ago
0