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stephaneguindon
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phyml
PhyML -- Phylogenetic estimation using (Maximum) Likelihood
GNU General Public License v3.0
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how to change the. `Compute approximate likelihood ratio test`option in command line?
#198
liamxg
opened
3 days ago
1
How can I determine the optimal number of substitution rate categories to use?
#197
liamxg
opened
1 month ago
3
A basic question about EX2 model
#196
evolbeginner
closed
1 month ago
2
which parameters should I use with the "lot of missing data"?
#195
liamxg
opened
1 month ago
2
Add support for Linux/Mac ARM64
#194
martin-g
closed
3 months ago
2
failure to compile phyml on macOS - call to undeclared function 'VELOC_Velocity_Variance_Along_Edge'
#193
ludjwick
closed
3 months ago
4
running error
#192
ceceNo1
opened
5 months ago
0
phytime compilation error
#191
pavelToman
opened
5 months ago
2
Smart Model Selection
#190
JamieBregman
opened
6 months ago
2
error
#189
liamxg
opened
8 months ago
0
One or more missing sequences in block 1.
#188
smoothyly
closed
8 months ago
2
Fixed bootstrap MPI bug: now computing the exact number of required b…
#187
vincent-lefort
closed
11 months ago
0
Compute TBE instead of FBP ? (y/N) >
#186
liamxg
closed
1 year ago
5
phyml can do model selection?
#185
liamxg
closed
1 year ago
3
Error in eigen.c when trying to use fixed nucleotide frequencies
#184
sodiumnitrate
closed
1 year ago
1
Unexpected number of bootstrap replicates
#183
Ivan-Pchelin
closed
11 months ago
24
error?
#182
liamxg
closed
1 year ago
1
Building the BioNJ trees
#181
KYQiu21
opened
1 year ago
5
Unable to compile phyml on M2 mac - MacOS Ventura V13.2
#180
RogerBumgarner
closed
1 year ago
2
issue with mpirun after updating to Ubuntu 22
#179
fermza
opened
1 year ago
21
Bootstrap error with custom model - Can't open file ''
#178
adamgicgier
closed
1 year ago
9
Err. in file 'make.c' (line 94)
#177
yardeng96
closed
2 years ago
9
how to make phylogenetic tree using numerical dataset.
#176
sekhwal
closed
2 years ago
1
Optimized branch lengths flag for user tree does not work properly
#175
GhJowkar
opened
2 years ago
0
Allow multiple executables to be built at once
#174
snehring
opened
2 years ago
0
build with --disable-native fails
#173
rekado
opened
2 years ago
3
Error runing phytime
#172
biozhajie
opened
2 years ago
0
How to calibrate the thousands of tips in phytime input file
#171
biozhajie
closed
2 years ago
1
Encountered an issue while loading the XML file with phytime
#170
biozhajie
opened
2 years ago
0
Improve amino-acids frequencies output for parsing
#169
vincent-lefort
closed
2 years ago
0
Ibm
#168
stephaneguindon
closed
2 years ago
0
PhyML Compiling Error on Windows (MSYS2)
#167
amduffy
opened
2 years ago
2
phytime fails to compile
#166
V-Z
opened
2 years ago
2
Compilation for non-AMD/Intel CPUs
#165
V-Z
closed
3 months ago
7
Cannot use "make" on MacOS for PhyML
#164
samandmac
closed
2 years ago
4
Compilation error for phytime
#163
dpryan79
closed
2 years ago
1
interpreting the log-likelihood in output
#162
ChangxuFan
closed
2 years ago
1
Unexpected error: no inferred tree result file.
#161
CarlsenA
closed
2 years ago
4
Changed boundaries for GTR param values
#160
stephaneguindon
closed
2 years ago
0
Opt aa freq
#159
stephaneguindon
closed
2 years ago
0
Versioning error again
#158
protist
closed
2 years ago
2
Failing to compile phytime and rf
#157
V-Z
closed
2 years ago
4
Can't build current version v3.3.20211021
#156
protist
closed
2 years ago
2
Segfault in bootstrap analysis
#155
afmagee
closed
3 years ago
1
Adjusting README for mpi compilation
#154
justNo4b
closed
3 years ago
3
Branch support not available?
#153
SticaC
closed
3 years ago
1
Wrong distance matrix output
#152
wdenggithub
closed
3 years ago
5
Unable to write file. Operation aborted.
#151
SholaA
closed
3 years ago
7
make error on Amazon Linux v2 & Ubuntu 16.04
#150
jiboucher
closed
3 years ago
2
Parallelizing PhyML bootstrapping
#149
sevance
opened
3 years ago
2
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