stjude-biohackathon / KIDS24-team13

MIT License
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napari-IDMS

License MIT PyPI Python Version tests codecov napari hub

Plugin to access IDMS from napari


This napari plugin was generated with Cookiecutter using @napari's cookiecutter-napari-plugin template.

Installation

You can install napari-IDMS via pip:

pip install napari-IDMS

Install napari

python -m pip install "napari[all]"

Open napari by typing the command

napari

Setup env variable for IDMS

conda env config vars set IDMS_API_ENDPOINT=''
conda env config vars set PYIDMS_PLUGIN_LOCATION=''
conda env config vars set IDMS_API_TOKEN=''

conda deactivate 'env_name'
conda activate 'env_name'

Contributing

Contributions are very welcome. Tests can be run with tox, please ensure the coverage at least stays the same before you submit a pull request.

License

Distributed under the terms of the MIT license, "napari-IDMS" is free and open source software

Issues

If you encounter any problems, please [file an issue] along with a detailed description.