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suhrig
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arriba
Fast and accurate gene fusion detection from RNA-Seq data
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Difference in non-template bases in fusions.tsv versus fusions.pdf
#161
kvaldez
closed
2 years ago
2
Does this software only work on humans?
#160
wiltbb
closed
2 years ago
12
GTF file parse
#159
denise0593
closed
2 years ago
2
Minimum Support Filter Not Working
#158
DarioS
closed
2 years ago
1
arriba vs starFusion/FusionInspector and protein frame call difference
#157
alexander-e-f-smith
closed
2 years ago
5
warning of unknown gene when using supplied protein domains.gff3
#156
alexander-e-f-smith
closed
2 years ago
2
Draw_fusions.R - how to adjust the height of the coverage track?
#155
nhjk-23
closed
2 years ago
5
make fails, zlib tar archive not found
#154
SethosII
closed
2 years ago
2
Interpretation of the results
#153
SepRah
closed
2 years ago
7
EXONIC_FRACTION default value
#152
micknudsen
closed
2 years ago
1
Update zlib to 1.2.12 and use stable URL
#151
iainrb
closed
2 years ago
2
Interpret columns - Split_reads1, Split_reads1 and discordant_mates
#150
PubuduSaneth
closed
2 years ago
2
what human reference genome should i use?
#149
yoongmin
closed
2 years ago
17
Issues with draw_fusion.R script
#148
yoongmin
closed
2 years ago
2
enhance sensitivity with possibly more false positives
#147
khestir
closed
2 years ago
2
Detecting Fusions to Intronic LINE1
#146
DarioS
closed
2 years ago
1
draw_fusions.R: Is it possible to visualize two positionally close fusions on a single figure?
#145
mkazanov
closed
2 years ago
1
blacklist/known fusion file with updated GENCODE
#144
tarfy
closed
2 years ago
2
Gene2 entry (in `fusions.tsv`) not following the format described in the manual
#143
PubuduSaneth
closed
2 years ago
2
Support for out-of-source builds
#142
elfring
closed
2 years ago
1
Addition of a build system generator
#141
elfring
closed
2 years ago
4
Issue with drawing fusion with hg19?
#140
ahdee
closed
2 years ago
10
Duplicates filter
#139
xiucz
closed
2 years ago
1
reserved identifier violation
#138
elfring
closed
2 years ago
4
Reference issue from download_reference.sh
#137
been9312
closed
2 years ago
2
How to recover a known fusion that is not in the known_fussions_list?
#136
elmerfer
closed
2 years ago
11
Junction & Spanning Reads Information
#135
eseffar
closed
3 years ago
4
Dynamic view of results with Shiny R
#134
lavauxt
closed
3 years ago
3
SAM records were malformed and ignored
#133
MazlinaIsmail
closed
3 years ago
7
Arriba drawing: Issue with draw_fusions.R ; Calls: drawProteinDomains -> mergeSimilarDomains
#132
AmyNjaaye
closed
3 years ago
5
Does Arriba remove the duplicated reads or just mark them?
#131
liuxiii
closed
3 years ago
9
breakpoint1 for fusion where site1=intergenic
#130
ypradat
closed
2 years ago
6
fusion filtering issue
#129
been9312
closed
3 years ago
6
Failed to run ./download_references.sh
#128
Chaosli98
closed
3 years ago
2
draw fusion strand error
#127
been9312
closed
3 years ago
4
Font change in draw_fusion.R
#126
been9312
closed
3 years ago
2
What is the source for included protein_domain_hg38?
#125
ahdee
closed
3 years ago
4
Multi-alignment but with high confidence tag
#124
xiucz
closed
3 years ago
2
Arriba with a specific genecode annotation version
#123
ConcettaDe4
closed
3 years ago
4
Problem with RAM Consumption
#122
eseffar
closed
3 years ago
7
Missing files ERROR: file not found/readable
#121
BoudSTER
closed
3 years ago
2
draw_fusions.R
#120
YspCoder
closed
3 years ago
21
Can Arriba generate fusion vcf?
#119
jiaan-yu
closed
3 years ago
6
Issue with draw_fusions.R
#118
SusanneLipp
closed
3 years ago
7
How I can generate the fastq file of chimeric reads for fusion.tsv?
#117
biosciences
closed
3 years ago
1
Identical fusion reported with different support values
#116
af8
closed
3 years ago
2
Some fusions are reported with no support at all
#115
af8
closed
3 years ago
2
Arriba for targeted RNAseq
#114
kvaldez
closed
3 years ago
2
ERROR: could not find sequence of contig '1'
#113
deb0612
closed
3 years ago
2
arriba for hg38
#112
deb0612
closed
3 years ago
3
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