sys-bio SBstoat issues - Githubissues

sys-bio / SBstoat

Parameter optimization using Tellurium

MIT License

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Support PEtab standard for parameter fitting.

#19 joseph-hellerstein opened 3 years ago
0
Performance improvements

#18 joseph-hellerstein opened 3 years ago
0
ModelFitter doesn't support cross validation

#17 joseph-hellerstein closed 3 years ago
2
Handle model suites.

#16 joseph-hellerstein opened 3 years ago
0
Logging should capture error output from tellurium.

#15 joseph-hellerstein opened 3 years ago
0
Validate keyword parameters

#14 joseph-hellerstein opened 3 years ago
1
Better progress indicator for bootstrapping

#13 joseph-hellerstein opened 3 years ago
0
GPU implementation of bootstrapping

#12 joseph-hellerstein opened 3 years ago
0
Serialization of ModelFitter should be robust to code changes.

#11 joseph-hellerstein closed 3 years ago
3
Look at pyPESTO

#10 joseph-hellerstein closed 3 years ago
1
Relate to pypesto

#9 joseph-hellerstein closed 3 years ago
1
Provide multiple starts for fitting

#8 joseph-hellerstein opened 3 years ago
1
Improvements to plots of fitted values

#7 joseph-hellerstein closed 3 years ago
4
Create test suite using BioModels

#6 joseph-hellerstein closed 3 years ago
1
Improved error checking for file formats for ModelFitter.

#5 joseph-hellerstein opened 3 years ago
1
Need to allow users to specify multiple observed data files

#4 hsauro closed 3 years ago
1
Running tests and PYTHONPATH

#3 hsauro opened 3 years ago
10
nose pacakge missing when running tests

#2 hsauro closed 3 years ago
1
Bugs in TimeseriesPlotter

#1 joseph-hellerstein closed 3 years ago
1