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taxonomicallyinformedannotation
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tima-r
https://taxonomicallyinformedannotation.github.io/tima-r/
https://taxonomicallyinformedannotation.github.io/tima-r
GNU General Public License v3.0
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non-zero exit status when installing dependency packages
#59
RemyMG
closed
1 year ago
4
[refactoring] Perform MS2 annotation on all libraries in a single step
#58
Adafede
closed
1 year ago
1
[refactoring] Split prepared annotations from features components
#57
Adafede
closed
1 year ago
1
[refactoring] Split MS1 annotation as separate process
#56
Adafede
closed
1 year ago
1
[enhancement] Fetch MGF from GNPS job ID if given
#55
Adafede
closed
1 year ago
1
Targets
#54
Adafede
closed
1 year ago
0
[architecture] use targets
#53
Adafede
closed
1 year ago
2
[architecture] have a parameter file for steps to perform
#52
Adafede
closed
9 months ago
1
[enhancement] internalize SIRIUS jobs using sirius-client-openAPI
#51
Adafede
opened
1 year ago
1
[housekeeping] clean taxon attribution
#50
Adafede
closed
1 year ago
1
[enhancement] mzTab-M support
#49
Adafede
opened
1 year ago
0
[architecture] have a file pattern working as current gnps job is among all steps
#48
Adafede
closed
1 year ago
1
[enhancement] network generation
#47
Adafede
closed
1 year ago
1
[enhancement] retention time matching
#46
Adafede
closed
1 year ago
1
Update docker/build-push-action action to v4
#45
renovate[bot]
closed
1 year ago
0
[ImgBot] Optimize images
#44
imgbot[bot]
closed
1 year ago
0
Build from source
#43
almahmoud
closed
1 year ago
1
Update nwtgck/actions-netlify action to v2
#42
renovate[bot]
closed
1 year ago
0
[test] Coverage Improvements
#41
Adafede
closed
1 year ago
1
Update docker/build-push-action action to v3
#40
renovate[bot]
closed
1 year ago
0
Update actions/cache action to v3
#39
renovate[bot]
closed
1 year ago
0
Dockerizing
#38
Adafede
closed
1 year ago
0
[ImgBot] Optimize images
#37
imgbot[bot]
closed
1 year ago
0
[ImgBot] Optimize images
#36
imgbot[bot]
closed
1 year ago
0
Can't combine `library` when running process_annotations in neg mode
#35
RemyMG
closed
1 year ago
4
[enhancement] group references by structure in output
#34
Adafede
closed
2 years ago
1
[enhancement] add chemical names
#33
Adafede
closed
2 years ago
1
add get_isdb step from Zenodo according to @oolonek s work.
#32
Adafede
closed
2 years ago
1
update adducts and neutral losses
#31
Adafede
closed
2 years ago
0
[bug] Cannot bind rows when no consensus are found
#30
Adafede
closed
2 years ago
2
Update actions/checkout action to v3
#29
renovate[bot]
closed
2 years ago
0
[enhancement] as a user, I want to be able to use tima-r from a simple MGF without pre-computed network
#28
Adafede
closed
2 years ago
6
[enhancement] refactor weighting part to better support multi-tool annotation
#27
Adafede
closed
2 years ago
1
Classical MN (METABOLOMICS-SNETS-V2)
#25
Adafede
closed
2 years ago
3
[enhancement] support manual mzmine feature table for taxa attribution
#24
Adafede
closed
2 years ago
3
[enhancement] support non-FBMN GNPS jobs
#23
Adafede
closed
2 years ago
1
FinalResults table not mantaining library, molecular formula and smiles information
#22
DanielCR92
closed
2 years ago
5
Update nwtgck/actions-netlify action to v1.2
#21
renovate[bot]
closed
2 years ago
0
Copy to clipboard button missing on documentation, vignette 3
#20
DanielCR92
closed
2 years ago
1
[enhancement] compute missing variables
#19
Adafede
opened
2 years ago
1
[enhancement] Completely remove empty candidates
#18
Adafede
closed
2 years ago
4
[ImgBot] Optimize images
#17
imgbot[bot]
closed
2 years ago
0
Dependency Dashboard
#16
renovate[bot]
opened
2 years ago
0
Update r-lib/actions action to v2
#15
renovate[bot]
closed
2 years ago
0
[CRAN] unassigned global variables
#14
Adafede
closed
1 year ago
1
[safety] add case when no components
#13
Adafede
closed
2 years ago
1
[safety] add case when no RT
#12
Adafede
closed
2 years ago
1
add references to cytoscape output
#11
Adafede
closed
2 years ago
1
[safety] add stop_if_not for each argument
#10
Adafede
closed
2 years ago
1
make filtering rules for MS1 results a parameter
#9
Adafede
closed
2 years ago
1
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