Networks, or graphs, are abstract representations of relations between entities. Metabolic networks represent chemical reactions between molecular metabolites within cells. It is possible to define these networks in different ways, with prominent differences.
DyMetaboNet illustrates these differences by dynamic definition and visualization of human metabolic networks.
DyMetaboNet is a partner of MetaboNet.
This file is part of project DyMetaboNet.
DyMetaboNet supports definition and analysis of custom metabolic networks. Copyright (C) 2019 Thomas Cameron Waller
DyMetaboNet is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
DyMetaboNet is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with DyMetaboNet. If not, see http://www.gnu.org/licenses/.
If you use DyMetaboNet, please cite its publication.
T. Cameron Waller, Jordan A. Berg, Brian E. Chapman, Jared P. Rutter. "Compartment and Hub Definitions Tune Metabolic Networks for Metabolomic Interpretations". Journal. Year. Issue. link
Check out a demonstration of the latest stable version at https://tcameronwaller.github.io/dymetabonet/
Watch a raw screen capture video of DyMetaboNet at https://zenodo.org/record/3382296