Probabilistic modeling toolkit version 3 See pmtk3.googlecode.com for details.

Steps:

1. run initPmtk3.m (takes a few minutes)
2. run testPmtk3.m (takes under a minute)
3. run runDemos.m (takes about 1 hour)

The code relies on various external toolboxes (in addition to those in pmtksupport), listed below:

opt : Mathworks optimization toolbox stats : Mathworks statistics toolbox image : Mathworks image processing toolbox bio : Mathworks bioinformatics toolbox gviz: graphviz libdai: libdai glmnet: glmnet (Fortran library not available for maci64) libsvm: libsvm (Matlab inferface) UGM: Mark Schmidt's UGM package

If some of these packages are missing and/or not compiled for your computer, some demos may be skipped.