tgbugs pyontutils issues

tgbugs / pyontutils

python utilities for working with ontologies

MIT License

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Update ontree.py

#53 tmsincomb closed 5 years ago
0
Hierarchy fix & view.txt documentation

#52 tmsincomb closed 5 years ago
0
general ilxutils update & SPARC extension

#51 tmsincomb closed 5 years ago
0
Olfactory cells are classified as reticular cells

#50 memartone opened 5 years ago
0
Why only one intrinsic neuron?

#49 memartone closed 3 years ago
0
Martinotti cell-problems classifying

#48 memartone closed 2 years ago
4
Projecting to nucleus of the diagonal band neuron

#47 memartone closed 2 years ago
1
Classification error

#46 memartone closed 5 years ago
1
Duplicate class

#45 memartone closed 2 years ago
1
Vestibular nuclei cells are missing from the CUTs. Please add.

#44 memartone opened 5 years ago
2
rdfs:label "Striatum GABAergic interneuron"

#43 memartone closed 2 years ago
1
genLabel "Mouse Neocortex +Adcy2 +CR +Calb2 +Grin3a +Inhbb +Nppc +Pde2a +RGS6 +RGS7 +SST +Sst +Zip1 +Znt3 GABARLower GLURHigher neuron (Huang2017)"

#42 memartone closed 2 years ago
1
CUT Martinotti cell

#41 memartone closed 2 years ago
1
reorganization

#40 tgbugs closed 5 years ago
1
All changes to ilxutils except berman.py

#39 tmsincomb closed 5 years ago
1
ontree flatten 500 errror

#38 tgbugs closed 4 years ago
1
scigraph_client Annotation.annotationPost bad return type

#37 tgbugs opened 6 years ago
0
extracting_pmids_from_neurolex.py update

#36 tmsincomb closed 5 years ago
0
ontree missing rdfs:subPropertyOf -> subPropertyOf translation

#35 tgbugs closed 6 years ago
0
decouple external resource dependent code

#34 tgbugs opened 6 years ago
3
move Ont Class, etc to their own file

#33 tgbugs opened 6 years ago
1
bad link to interlex on http://ontology.neuinfo.org/docs/NIF-Ontology/README.html

#32 tgbugs closed 2 years ago
1
joblib 0.12.2 unpickling issues

#31 tgbugs closed 4 years ago
1
break allen cell types into two files and follow the pattern from huang2017

#30 tgbugs closed 2 years ago
5
cli and cli_test.py

#29 tmsincomb closed 6 years ago
1
ontload fails silently on pull if --force was used

#28 tgbugs opened 6 years ago
0
parcellation fsl atlases fails silently if source xml not present

#27 tgbugs opened 6 years ago
0
switch neurons graphBase/Config to use Ont

#26 tgbugs closed 2 years ago
1
ttlser reordring of lists breaks propertyChainAxiom

#25 tgbugs closed 6 years ago
0
ontload remove debug.log files from zip

#24 tgbugs opened 6 years ago
0
Updating ilxutils

#23 tmsincomb closed 6 years ago
3
hierarchies dematerialization issues

#22 tgbugs opened 6 years ago
0
Got a ModuleNotFoundError for 'pyontutils' when using NeuronLangExample.ipynb

#21 MFSY closed 2 years ago
2
fix typos

#20 katrinleinweber closed 6 years ago
2
ttlser add tests for XMLLiteral serialization determinism

#19 tgbugs opened 6 years ago
0
consolidate various tools into a basic utilties script

#18 tgbugs opened 7 years ago
0
scigraph_client needs to fail loudly on auth

#17 tgbugs closed 6 years ago
0
ttlser fails if a literal is a subject

#16 tgbugs closed 2 years ago
2
ttlser should shorten when colons or underscores are present later in a uri

#15 tgbugs opened 7 years ago
0
slimgen ncbigene definedForTaxon improper modelling

#14 tgbugs opened 7 years ago
0
ttlser determinism fails when OWLAPI reparents disjointness axioms

#13 tgbugs opened 7 years ago
3
scig fails on pipe

#12 tgbugs closed 2 years ago
1
Update paxinos09names.txt

#11 christian-oreilly closed 7 years ago
0
ttlser fails to deterministically serialize owl:Axiom entries

#10 tgbugs closed 6 years ago
1
ttlser serializes shortened ontology iris

#9 tgbugs opened 7 years ago
0
ttlser.py still not actually deterministic

#8 tgbugs closed 7 years ago
2
scr_sync.py using bad identifier for university

#7 tgbugs opened 8 years ago
0
scigraph_client relationshipType escaping causes double escape?

#6 tgbugs closed 8 years ago
1
scigraph_client bug in Graph.getEdges

#5 tgbugs closed 8 years ago
1
scigraph_client should return empty list instead of None on 404

#4 tgbugs closed 8 years ago
0

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