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tgen
/
jetstream_resources
Collection of scripts and README files tracking the source and generation of reference genomes and annotation files
MIT License
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CHIP updates
#76
fmadrid2
opened
1 year ago
0
Release v1.2.2
#75
bryce-turner
closed
1 year ago
1
Adding execute permissions to shell scripts
#74
bryce-turner
closed
1 year ago
1
Updated coyote capture kits
#73
bryce-turner
closed
1 year ago
1
Tempe bwa index updates
#72
bryce-turner
closed
1 year ago
1
collect study timing updates
#71
bryce-turner
closed
1 year ago
0
SigProfiler.py script updates
#70
bryce-turner
closed
1 year ago
0
T2T GTF
#69
PedalheadPHX
opened
1 year ago
0
Tempe and Sonoran Updates
#68
bryce-turner
closed
1 year ago
0
Sonoran updates
#67
bryce-turner
closed
1 year ago
0
Tempe updates
#66
bryce-turner
closed
1 year ago
0
Phoenix Capture Kits
#65
PedalheadPHX
closed
1 year ago
1
Suncity Capture_kits.csv
#64
PedalheadPHX
closed
1 year ago
1
Canine updates
#63
bryce-turner
closed
2 years ago
0
Add TOE to master correctly
#62
PedalheadPHX
closed
2 years ago
1
Adding TOE kit that was not tracked correctly
#61
PedalheadPHX
closed
2 years ago
0
Pull TC1 kit into master for production usage
#60
PedalheadPHX
closed
2 years ago
1
Adding TC1 kit
#59
PedalheadPHX
closed
2 years ago
1
Creation of ${GTF_FILE_BASE}.gene.bed and ${GTF_FILE_BASE}.exon.bed needs to operate off column matching
#58
bryce-turner
opened
2 years ago
1
Supports releases v1.2.x
#57
bryce-turner
closed
3 years ago
0
Adding more supporting files and readme update
#56
bryce-turner
closed
3 years ago
0
Pulling create_cnv_pon script into workflow_sync for exome updates
#55
bryce-turner
closed
3 years ago
0
Create cnv pon script
#54
bryce-turner
closed
3 years ago
0
Synchronizing workflows and reducing duplicate code
#53
bryce-turner
closed
3 years ago
0
Annot seg bugfix
#52
bryce-turner
closed
3 years ago
0
Redundant exons
#51
PedalheadPHX
opened
3 years ago
1
CDS PADDED FILES FOR TMB
#50
PedalheadPHX
closed
3 years ago
0
Phoenix - Pairoscope - Region to be skipped - Structural Variant - Exome -TumorOnly
#49
ChristopheLegendre
closed
3 years ago
1
Resource updates
#48
bryce-turner
closed
3 years ago
0
Phoenix updates
#47
bryce-turner
closed
3 years ago
0
Cactus mouse updates
#46
bryce-turner
closed
3 years ago
0
Msisensor pro updates
#45
bryce-turner
closed
3 years ago
0
Coyote updates
#44
bryce-turner
closed
3 years ago
0
Msisensor pro updates
#43
denriquez
closed
3 years ago
1
Suncity updates
#42
bryce-turner
closed
3 years ago
0
Star fusion updates
#41
bryce-turner
closed
3 years ago
0
Coyote updates
#40
bryce-turner
closed
3 years ago
0
Star fusion updates
#39
bryce-turner
closed
3 years ago
0
Update report_cpu_usage.py
#38
bryce-turner
closed
3 years ago
0
Syncing coyote_updates with master
#37
bryce-turner
closed
4 years ago
1
Suncity updates
#36
bryce-turner
closed
4 years ago
0
Add automatic mappability file creation for suncity
#35
ChristopheLegendre
closed
4 years ago
3
merge master only updates to develop
#34
PedalheadPHX
closed
4 years ago
1
Update Salmon for non-phoenix workflows
#33
PedalheadPHX
closed
3 years ago
0
Pulling current updated made for phoenix updates into master
#32
PedalheadPHX
closed
4 years ago
1
Phx updates
#31
PedalheadPHX
closed
4 years ago
0
Update for Copy number centromere and encode and mappability
#30
PedalheadPHX
closed
4 years ago
0
Merging master changes
#29
bryce-turner
closed
4 years ago
0
Adding snpSniffer file creation for Phoenix and Suncity
#28
PedalheadPHX
closed
4 years ago
0
Phx updates
#27
PedalheadPHX
closed
4 years ago
1
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