bindome

Getting started

Please refer to the documentation. In particular, the

• API documentation.

What is bindome ?

Bindome is a repository that gathers and assembles biomolecular binding data (protein-DNA/RNA) from genomics studies into data representations that allow downstream ML-tasks.

How to use it?

Import the package

import bindome as bd

Installation

You need to have Python 3.8 or newer installed on your system. If you don't have Python installed, we recommend installing Miniconda <https://docs.conda.io/en/latest/miniconda.html>_.

There are several alternative options to install bindome:

1. Install the latest development version:

pip install git+https://github.com/theislab/bindome.git@main

Release notes

See the changelog.

Contact

For questions and help requests, you can reach out in the scverse discourse. If you found a bug, please use the issue tracker.

Citation

for cite bindome, please use the following:

@software{bindome,
  author = {Ibarra}},
  doi = {},
  month = {},
  title = {{bindome}},
  url = {https://github.com/theislab/bindome},
  year = {2022}
}