Please refer to the documentation. In particular, the
Bindome is a repository that gathers and assembles biomolecular binding data (protein-DNA/RNA) from genomics studies into data representations that allow downstream ML-tasks.
Import the package
import bindome as bd
You need to have Python 3.8 or newer installed on your system. If you don't have
Python installed, we recommend installing Miniconda <https://docs.conda.io/en/latest/miniconda.html>
_.
There are several alternative options to install bindome:
pip install git+https://github.com/theislab/bindome.git@main
See the changelog.
For questions and help requests, you can reach out in the scverse discourse. If you found a bug, please use the issue tracker.
for cite bindome, please use the following:
@software{bindome,
author = {Ibarra}},
doi = {},
month = {},
title = {{bindome}},
url = {https://github.com/theislab/bindome},
year = {2022}
}