theislab / cellrank_notebooks

Tutorials and examples for CellRank.
https://cellrank.org
BSD 3-Clause "New" or "Revised" License
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cellrank examples tutorials

|PyPI| |Downloads| |CI| |Docs| |Codecov| |Discourse|

CellRank notebooks

CellRank is a modular framework to study cellular dynamics based on Markov state modeling of multi-view single-cell data. Please see the main repo_ to learn more.

.. |PyPI| image:: https://img.shields.io/pypi/v/cellrank.svg :target: https://pypi.org/project/cellrank :alt: PyPI

.. |Downloads| image:: https://static.pepy.tech/badge/cellrank :target: https://pepy.tech/project/cellrank :alt: Downloads

.. |Discourse| image:: https://img.shields.io/discourse/posts?color=yellow&logo=discourse&server=https%3A%2F%2Fdiscourse.scverse.org :target: https://discourse.scverse.org/c/ecosystem/cellrank/ :alt: Discourse

.. |CI| image:: https://img.shields.io/github/actions/workflow/status/theislab/cellrank/test.yml?branch=main :target: https://github.com/theislab/cellrank/actions :alt: CI

.. |Docs| image:: https://img.shields.io/readthedocs/cellrank :target: https://cellrank.readthedocs.io/ :alt: Documentation

.. |Codecov| image:: https://codecov.io/gh/theislab/cellrank/branch/main/graph/badge.svg :target: https://codecov.io/gh/theislab/cellrank :alt: Coverage

.. _main repo: https://github.com/theislab/cellrank