Unable to pip install PyVCF

theislab / hadge

Comprehensive pipeline for donor demultiplexing in single cell

https://hadge.readthedocs.io/en/latest/

MIT License

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Unable to pip install PyVCF #58

Open JHYSiu opened 3 months ago

JHYSiu commented 3 months ago

I'm unable to pip install PyVCF (error in PyVCF setup command: use_2to3 is invalid.)

Can you let me know which version of PyVCF you are using? Thanks!

Zethson commented 3 months ago

Hi,

which commands are you trying to use to run the pipeline? We need more context and information, please. We recommend that you run it with an existing profile.