theosanderson / gensplore

Lightweight genome browser for microbial genomes
https://gensplore.theo.io
8 stars 1 forks source link

Gensplore

A simple genome browser for smallish genomes (e.g. viruses and bacteria)

image

https://gensplore.genomium.org/

Adding custom genomes

For viewing a custom genome every now and then, just use the "Choose file" option. If you are doing this all the time you might want an easier method. Bacterial genomes load too slowly from NCBI for us to load them directly, but you can upload your own to a website that allows CORS access, then go to http://gensplore.theo.io/?gb=http://mywebsite.com/myfile.gb. If you have trouble with this feel free to raise an Issue and we may be able to add your genome.

React component

There is now a React component for embedding Gensplore in your own website. See here for details.