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thortiede
/
sbml4j
Load SBML Files and persist them in Neo4j
MIT License
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Cleanup data model
#43
thortiede
closed
5 years ago
0
Flat species in same db
#42
thortiede
closed
5 years ago
0
Reaction in simple model
#41
thortiede
closed
5 years ago
0
Secondary Gene names for ExternalResources not set
#40
thortiede
closed
5 years ago
3
Dockerize
#39
thortiede
closed
5 years ago
0
undirected edges in ppi might need to be doubled to be available for both directions
#38
thortiede
opened
5 years ago
1
Enpoint for getting surrounding network for GeneName
#37
thortiede
closed
3 years ago
2
Refactor data model
#36
thortiede
closed
5 years ago
0
Unify id system
#35
thortiede
closed
5 years ago
0
Fire and Store Events for Database-Actions
#34
thortiede
opened
5 years ago
0
Network mapping
#33
thortiede
closed
5 years ago
0
CVTermMap not persisted
#32
thortiede
closed
5 years ago
2
Not all Models have a compartment
#31
thortiede
closed
5 years ago
1
Unique Identifier of Nodes
#30
thortiede
closed
3 years ago
4
Modularize the use of SBML Extensions
#29
thortiede
closed
5 years ago
2
Volume mit Rohdaten
#28
thortiede
closed
5 years ago
1
Service to display loaded networks
#27
thortiede
closed
3 years ago
3
Containerize
#26
thortiede
closed
5 years ago
7
load metabolic networks from kegg
#25
thortiede
closed
5 years ago
4
Load more databases
#24
thortiede
opened
5 years ago
6
Issue16
#23
thortiede
closed
5 years ago
0
Issue8
#22
thortiede
closed
5 years ago
0
GraphQualitativeSpecies with extra inCompartment
#21
thortiede
closed
5 years ago
1
Transitions need to uniform names
#20
thortiede
closed
3 years ago
1
Create QualSpecies and Transitions only if it is a qualitative Model
#19
thortiede
closed
5 years ago
2
Inherit common Properties from common ancestor
#18
thortiede
closed
5 years ago
2
No constraints nor Indexes on the Datamodel so far
#17
thortiede
closed
3 years ago
8
Model gets overridden in GraphSpecies
#16
thortiede
closed
5 years ago
4
Simple Reaction Endpoint
#15
thortiede
closed
5 years ago
0
Allow File Upload
#14
thortiede
closed
5 years ago
1
No information about the organism is stored
#13
thortiede
opened
5 years ago
2
Started introducing a sif-service with datatype to hold one entry.
#12
thortiede
closed
5 years ago
0
Hate oas
#11
thortiede
closed
5 years ago
0
Add HATEOAS for hypermedia outputs
#10
thortiede
closed
3 years ago
2
SIF Writer
#9
thortiede
closed
5 years ago
0
Log4j error on startup
#8
thortiede
closed
5 years ago
1
Reading in sboTerm and id from transition element not possible
#7
thortiede
closed
2 years ago
4
GraphModel duplicate on reload
#6
thortiede
closed
5 years ago
1
Spring rest no swagger
#5
thortiede
closed
5 years ago
0
mvwn files in repository
#4
thortiede
closed
5 years ago
1
Spring rest no swagger
#3
thortiede
closed
5 years ago
1
SBML property sign in Input of Transition not defined in SBML L3V1
#2
thortiede
closed
5 years ago
3
Model does not store original filename
#1
thortiede
closed
5 years ago
3
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