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tjlane / pypad

Intuitive, high-level interface to the CSPAD
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optgeom gives error when range in angular average is not specified #10

Closed sellberg closed 11 years ago

sellberg commented 11 years ago

if radius_range: None is specified in filter_params.yaml, which it is if no range is selected, optgeom gives the following error:

Set parameter : minf_size --> 3 Traceback (most recent call last): File "/Library/Frameworks/Python.framework/Versions/Current/bin/optgeom", line 5, in pkg_resources.run_script('pypad==0.0.1', 'optgeom') File "/Library/Frameworks/Python.framework/Versions/6.3/lib/python2.6/site-packages/pkg_resources.py", line 467, in run_script self.require(requires)[0].run_script(script_name, ns) File "/Library/Frameworks/Python.framework/Versions/6.3/lib/python2.6/site-packages/pkg_resources.py", line 1200, in run_script execfile(script_filename, namespace, namespace) File "/Library/Frameworks/Python.framework/Versions/6.3/lib/python2.6/site-packages/pypad-0.0.1-py2.6.egg/EGG-INFO/scripts/optgeom", line 102, in main() File "/Library/Frameworks/Python.framework/Versions/6.3/lib/python2.6/site-packages/pypad-0.0.1-py2.6.egg/EGG-INFO/scripts/optgeom", line 92, in main optizor = opt.Optimizer(geometry, optimization_params) File "/Library/Frameworks/Python.framework/Versions/6.3/lib/python2.6/site-packages/pypad-0.0.1-py2.6.egg/pypad/autogeom/optimize.py", line 112, in init** self.radius_range = np.sort(np.array(self.radius_range, dtype=np.float)) ValueError: setting an array element with a sequence.