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tkkarjal
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magia
Automated brain PET analysis pipeline
https://doi.org/10.3389/fninf.2020.00003
MIT License
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Bugfix
#55
tkkarjal
closed
4 years ago
0
Cleaned up the code in aivo_set_info
#54
tkkarjal
closed
4 years ago
0
Magia2 bugfix
#53
buccimtpc
closed
4 years ago
0
Support automated calculation of GU for FDG-studies
#52
tkkarjal
closed
4 years ago
0
Add files via upload
#51
tkkarjal
closed
4 years ago
0
Fixed a problem with MNI atlases
#50
tkkarjal
closed
4 years ago
0
Fix magia read specs
#49
tkkarjal
closed
4 years ago
0
magia_read_specs.m saves numeric values as char
#48
eebrown
closed
4 years ago
2
Update aivo functions to support updated Magia
#47
tkkarjal
closed
4 years ago
0
Added functions for converting Ki's to GU
#46
tkkarjal
closed
4 years ago
0
No fs if atlas
#45
tkkarjal
closed
4 years ago
0
Add files via upload
#44
tkkarjal
closed
4 years ago
0
Added WM as (pseudo)reference region for FMPEP
#43
tkkarjal
closed
4 years ago
0
Separate aivo functions
#42
tkkarjal
closed
4 years ago
1
Delete unnecessary files
#41
tkkarjal
closed
4 years ago
0
Uploaded magia2 files
#40
tkkarjal
closed
4 years ago
0
Added radioactivity templates
#39
tkkarjal
closed
4 years ago
0
Ma1
#38
tkkarjal
closed
5 years ago
0
Added Logan support
#37
tkkarjal
closed
5 years ago
0
Update magia_get_roi_info.m
#36
buccimtpc
closed
5 years ago
0
Add recon_all try catch functionality
#35
buccimtpc
opened
5 years ago
1
Feature request: Save ROI volumes
#34
eebrown
closed
4 years ago
2
ROI level SUV calculations
#33
tkkarjal
closed
5 years ago
0
Rename ARCHIVE_DIR to MAGIA_ARCHIVE
#32
tkkarjal
closed
5 years ago
0
fix magia for ref modeling without mri
#31
tkkarjal
closed
5 years ago
0
Change hard-coded paths to getenv() for pipeline portability
#30
eebrown
closed
5 years ago
1
Fix of input qc (aivo get subjects needs fixes too!)
#29
buccimtpc
closed
5 years ago
0
Update aivo_set_info.m (add weight and height in the proper places)
#28
buccimtpc
closed
5 years ago
1
Update aivo_get_info.m (Critical for Tatu and Severi!)
#27
buccimtpc
closed
4 years ago
2
Ftha - implementation
#26
buccimtpc
closed
5 years ago
0
[18f]ftha default options for fur not found!
#25
buccimtpc
closed
5 years ago
2
get_frames_dcm
#24
buccimtpc
closed
5 years ago
2
New modeling option end time
#23
tkkarjal
closed
5 years ago
0
Speed up pipeline with multiple threads
#22
eebrown
closed
5 years ago
4
Patlak_ref: Renamed cut_time to end_time
#21
tkkarjal
closed
5 years ago
0
Improve ROI correction
#20
tkkarjal
closed
6 years ago
1
Always calculate parametric images before spatial normalization
#19
tkkarjal
closed
4 years ago
3
Always correct ROIs so that voxels outside the brain are discarded
#18
tkkarjal
opened
6 years ago
1
use suvr as the default model for new tracers
#17
tkkarjal
closed
6 years ago
0
magia_check_freesurfed does not work always
#16
tkkarjal
closed
4 years ago
1
aivo separated from magia
#15
tkkarjal
closed
6 years ago
0
Separate AIVO and MAGIA
#14
tkkarjal
closed
6 years ago
1
added nii column in aivo.pet
#13
tkkarjal
closed
6 years ago
0
Get rid of ECAT files
#12
tkkarjal
closed
4 years ago
1
Renew data reading from aivo
#11
tkkarjal
closed
6 years ago
0
no more nifti toolbox
#10
tkkarjal
closed
6 years ago
0
read and write githash to aivo
#9
tkkarjal
closed
6 years ago
0
SUVR for dynamic images
#8
tkkarjal
closed
6 years ago
0
Plasma input function QC
#7
tkkarjal
closed
6 years ago
0
FUR scaled so that units match
#6
tkkarjal
closed
6 years ago
0
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