tlawrence3 FAST issues - Githubissues

tlawrence3 / FAST

FAST: Fast Analysis of Sequences Toolbox

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INSTALL: Change to installing "Sort::key"

#69 dr-aheydari closed 5 years ago
1
This is the tested addition of -M/--modulus option to fasfilter

#68 dhard closed 5 years ago
0
Dhard patch 2 modulus fasfilter

#67 dhard closed 5 years ago
0
add -M/--modulus option to fasffilter

#66 dhard closed 5 years ago
0
fassub should add -f and -S options to transform only specific fields in the description, and -t to transform the values of tagged fields

#65 dhard opened 6 years ago
0
`faswc` gives incorrect counts

#64 arendsee closed 7 years ago
6
Parser module created

#63 iotaaxel closed 7 years ago
0
Updated fasgrep based on faswc

#62 iotaaxel closed 5 years ago
2
Remove --format from all updated utilities with the new fast/q parser

#61 dhard opened 7 years ago
0
Update file parser for fasxl

#60 tlawrence3 opened 7 years ago
0
Update file parser for faswc

#59 tlawrence3 closed 7 years ago
1
Update file parser for faswc

#58 tlawrence3 closed 7 years ago
1
Update file parser for fasuniq

#57 tlawrence3 opened 7 years ago
0
Update file parser for fastr

#56 tlawrence3 opened 7 years ago
0
Update file parser for fastaxsort

#55 tlawrence3 opened 7 years ago
0
Update file parser for fastax

#54 tlawrence3 opened 7 years ago
0
Update file parser for fastail

#53 tlawrence3 opened 7 years ago
0
Update file parser for fassub

#52 tlawrence3 opened 7 years ago
0
Update file parser for fassort

#51 tlawrence3 opened 7 years ago
0
Update file parser for fasrc

#50 tlawrence3 opened 7 years ago
0
Update file parser for faspaste

#49 tlawrence3 opened 7 years ago
0
Update file parser for faslen

#48 tlawrence3 opened 7 years ago
0
Update file parser for fashead

#47 tlawrence3 opened 7 years ago
0
Update file parser for fasgrep

#46 tlawrence3 opened 7 years ago
1
Update file parser for fasfilter

#45 tlawrence3 opened 7 years ago
0
Update file parser for fascut

#44 tlawrence3 opened 7 years ago
0
Update file parser for fascomp

#43 tlawrence3 opened 7 years ago
0
Update file parser for fascodon

#42 tlawrence3 opened 7 years ago
0
Update file parser for alnpi

#41 tlawrence3 opened 7 years ago
0
Update file parser for alncut

#40 tlawrence3 opened 7 years ago
0
Update file parser for faswc

#39 tlawrence3 closed 7 years ago
0
fasfilter doesn't gracefully handle when a tag doesn't exist in the description

#38 dhard opened 7 years ago
0
Fixed STDIN error when not connected to a terminal. FAST tools now be…

#37 tlawrence3 closed 7 years ago
0
Taint mode prevents FAST installation in user folders

#36 mfasold closed 8 years ago
1
faswc doesn't handle null input gracefully

#35 dhard opened 9 years ago
0
fastaxsort --index doesn't handle synonyms

#34 dhard opened 9 years ago
0
fassort -t doesn't handle missing data

#33 dhard opened 9 years ago
0
No error when supplying .fasta.gz file

#32 tseemann opened 9 years ago
2
How do I list all the tools included in FAST ?

#31 tseemann closed 9 years ago
4
Use /usr/bin/env for hash-bang lines

#30 tseemann closed 8 years ago
2
Thank you for the citation

#29 tseemann closed 8 years ago
0
Testing for STDIN

#28 tlawrence3 closed 7 years ago
1
Test Suite for Scripts

#27 dhard opened 9 years ago
0
Test::Script::Run unsupported; Windows, Perl 5.18.4

#26 peterbecich closed 8 years ago
0
Two tests fail in fascut.t and FAST.t; Windows, Perl 5.16.3

#25 peterbecich closed 9 years ago
1
Installation on Perl Naive systems

#24 dhard closed 8 years ago
6
Cookbook Update to reflect new utility names and options

#23 dhard closed 9 years ago
1
gbfcut options

#22 dhard closed 9 years ago
0
GenBank in documentation

#21 dhard closed 9 years ago
0
alnpi documentation

#20 kkauffman closed 9 years ago
0