This repository contains R code associated with the CAMP Rotary Screw Trap platform.
The RST platform is a data base application that collects and manages rotary screw
trap data, and was originally built for the network of rotary screw traps in rivers
of the central valley of California. These R code files are called from the application
to do analyses.
campR
into the platform# Set directory to the R/library folder in the The Platform application
campR.Rdir <- "C:/Users/trent/Documents/Projects/1200-RSTPlatform/ThePlatform/CAMP_RST20220103-campR2.0.14/R/library"
# Install a new version of campR into the application
withr::with_libpaths(campR.Rdir, devtools::install(upgrade ="never"))
Steps to update the version of R used in The Platform:
DESCRIPTION
for
the list of Imports and Dependencies. Do this with statements like:
# Set lib directory
newLib <- "C:/Users/trent/Documents/Projects/1200-RSTPlatform/ThePlatform/CAMP_RST20220103-campR2.0.14/R/library"
campRImports <- c("RODBC", "DBI", "splines", "dplyr", "RPostgres", "httr", "crayon", "magrittr", "knitr", "ellipse", "jsonlite", "mvtnorm", "quantreg", "SparseM", "MatrixModels") install.packages(campRImports, lib = newLib)