tresoldi ngesh issues - Githubissues

tresoldi / ngesh

A Python library for generating random phylogenetic trees and related data

MIT License

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Added new faster version of random_tree.py

#16 NicolaDM closed 3 years ago
1
Allow different distributions for bad sampling simulation

#15 tresoldi opened 4 years ago
2
Allow different distributions for HGT simulation

#14 tresoldi closed 3 years ago
1
Implement distribution of character specific mutation rate

#13 tresoldi opened 4 years ago
1
Replace standard library random calls with numpy equivalents

#12 tresoldi closed 4 years ago
1
Simulate a "donation power" for taxa

#11 tresoldi opened 4 years ago
1
Rewrite functions with too many arguments to accept dictionaries of parameters

#10 tresoldi closed 4 years ago
1
Allow simulation of data problems

#9 tresoldi closed 4 years ago
1
Allow to exclude non extant taxa from horizontal gene transfer events

#8 tresoldi closed 3 years ago
1
Look for default parameters that are more closely related to linguistic trees

#7 tresoldi closed 3 years ago
1
Add stopping criterion on the global number of nodes

#6 tresoldi closed 4 years ago
2
Allow hard politomies from the command line

#5 tresoldi closed 4 years ago
1
Allow generation of unlabelled trees from the command-line

#4 tresoldi closed 4 years ago
1
Drop the abzu library

#3 tresoldi closed 4 years ago
1
Write iterator given distance from root

#2 tresoldi closed 4 years ago
1
Allow naming internal nodes

#1 tresoldi closed 4 years ago
1