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tskit-dev
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msprime
Simulate genealogical trees and genomic sequence data using population genetic models
GNU General Public License v3.0
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update changelog
#2227
GertjanBisschop
closed
6 months ago
1
1.3.0 Release
#2226
jeromekelleher
closed
4 months ago
2
dtwf/ped stats tests
#2225
GertjanBisschop
closed
6 months ago
1
fix sorting bug pedigrees
#2224
GertjanBisschop
closed
6 months ago
1
Island model - migration rate definition
#2223
JaneeshBansal
closed
7 months ago
1
Update development.md
#2222
daikitag
closed
7 months ago
1
CpG mutation models
#2221
hyanwong
opened
7 months ago
4
Update DOI msprime 1.0 paper CITATION.md
#2220
GertjanBisschop
closed
8 months ago
1
No Sweep Model for Spatially Structured Populations
#2218
YuanboSong
opened
8 months ago
1
Inconsistencies between algorithm.c and algorithm.py
#2217
YuanboSong
opened
8 months ago
1
Fix docs build warning
#2216
benjeffery
closed
8 months ago
1
Update pedigree doc
#2214
daikitag
closed
8 months ago
4
Example to simulate multiple bottlenecks for a population over several time points
#2213
yzliu01
closed
8 months ago
4
Clarify the population size is diploid (by default)
#2212
hyanwong
closed
8 months ago
4
draw_pedigree documentation
#2211
daikitag
closed
8 months ago
3
Documentation for replicate_index
#2210
daikitag
opened
8 months ago
3
Update PyPI auth method
#2208
benjeffery
closed
8 months ago
1
Update pre commit
#2207
benjeffery
closed
8 months ago
3
Update deps, remove py37 and fix test warnings
#2206
benjeffery
closed
8 months ago
1
Update docs build
#2205
benjeffery
closed
8 months ago
1
Problem with Demography Debugger output
#2204
helmutsimon
closed
9 months ago
2
Set favicon
#2202
jeromekelleher
closed
9 months ago
5
Clean up config and get version working
#2201
jeromekelleher
closed
9 months ago
3
Publish pip wheels for Windows
#2200
tomwhite
opened
10 months ago
1
raise error when recording migrants
#2199
GertjanBisschop
closed
10 months ago
1
The error for importing msprime
#2198
frezaei98
closed
10 months ago
1
Change docs theme to sphinx-book-theme
#2197
benjeffery
closed
10 months ago
1
parent node having a time value <= to its child
#2195
connor-french
closed
10 months ago
8
update docs
#2194
GertjanBisschop
closed
11 months ago
4
Update docs config
#2193
benjeffery
closed
11 months ago
1
Update docs deps
#2192
benjeffery
closed
11 months ago
0
recording migrants with sweep model
#2190
GertjanBisschop
closed
9 months ago
3
Update intro.md to add tutorial links
#2189
hyanwong
closed
11 months ago
1
problems with gsl version in pyslim 1.0.3
#2187
ShyamieG
closed
12 months ago
6
Recording recombination events
#2186
GertjanBisschop
closed
1 year ago
1
additional_nodes docs
#2185
GertjanBisschop
closed
11 months ago
2
msprime.simulate() - Generates Value error on call to `ts.as_fasta()` when Ne is set
#2184
isaacovercast
closed
1 year ago
1
auto_flush_edges
#2183
GertjanBisschop
closed
1 year ago
1
Autoflush edges in the simulator
#2182
jeromekelleher
closed
1 year ago
1
Prototype
#2181
jeromekelleher
closed
11 months ago
1
Test and build wheels on 3.11
#2180
benjeffery
closed
11 months ago
5
Python 3.11 wheels
#2177
tomwhite
closed
11 months ago
1
Additional_nodes DTWF/FIXED_PEDIGREE
#2176
GertjanBisschop
closed
1 year ago
1
doi for msprime 1.0 is not correct
#2175
xin-huang
closed
7 months ago
2
modified stats test unary nodes
#2174
GertjanBisschop
closed
1 year ago
1
clarification to migration documentation
#2173
petrelharp
closed
1 year ago
1
Fix codecov with token
#2170
benjeffery
closed
1 year ago
5
Fix codecov
#2169
benjeffery
closed
1 year ago
0
Update verification.py to use coalescent_segments_only flag
#2168
GertjanBisschop
closed
1 year ago
1
enable additional_nodes and coalescing_segments_only flags for DTWF and FixedPedigree
#2167
GertjanBisschop
closed
1 year ago
1
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