issues
search
tskit-dev
/
tstrait
Quantitative trait simulation for ARGs
https://tskit.dev/software/tstrait
MIT License
6
stars
6
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Add mode argument to genetic_value and edge_effect_size function
#155
jeromekelleher
opened
1 month ago
0
Generalise the traversal algorithm to return node values
#154
jeromekelleher
closed
1 month ago
1
Fix Actions versions
#153
benjeffery
closed
2 months ago
0
Bump actions/download-artifact from 3 to 4.1.7 in /.github/workflows
#152
dependabot[bot]
closed
2 months ago
0
DOC: Citation
#151
daikitag
closed
3 months ago
1
Update contributing.md
#150
daikitag
closed
5 months ago
0
Fix codecov
#149
benjeffery
closed
7 months ago
1
New model for trait simulation
#148
hanbin973
closed
5 months ago
1
Version 0.1.0 release
#147
daikitag
closed
6 months ago
11
Version 0.2.0 Release
#146
daikitag
closed
8 months ago
4
CODE: normalise_genetic_value
#145
daikitag
closed
8 months ago
1
Normalize genetic values
#144
daikitag
closed
8 months ago
0
Numba version
#143
daikitag
closed
8 months ago
2
DOC: Minor modification
#142
daikitag
closed
8 months ago
1
DOC: Freq-dep
#141
daikitag
closed
8 months ago
1
INFRA: Exact tests
#140
daikitag
closed
8 months ago
1
INFRA: multithreading
#139
daikitag
closed
8 months ago
1
Qqplot 2sample
#138
daikitag
closed
8 months ago
1
Exact comparison
#137
daikitag
closed
9 months ago
6
CODE: Ddof
#136
daikitag
closed
9 months ago
3
Degrees of freedom in standard deviation computation
#135
daikitag
closed
9 months ago
3
CODE: Genetic value
#134
daikitag
closed
9 months ago
2
DOC: Numericalisation-genotype
#133
daikitag
closed
8 months ago
1
INFRA: Statistical test against external simulators
#132
daikitag
closed
8 months ago
3
CODE/DOC: Centre
#131
daikitag
closed
9 months ago
3
CODE: normalise
#130
daikitag
closed
9 months ago
2
Verification
#129
daikitag
closed
9 months ago
2
Specifying mean and variance of simulated phenotypes
#128
daikitag
closed
9 months ago
4
Option to add -\beta to non-causal nodes
#127
daikitag
closed
8 months ago
1
DOC: causal_site documentation
#126
daikitag
closed
9 months ago
4
Quickstart documentation
#125
daikitag
closed
9 months ago
1
CODE: causal_sites
#124
daikitag
closed
9 months ago
3
DOC: Minor changes
#123
daikitag
closed
11 months ago
1
DOC: Model input
#122
daikitag
closed
11 months ago
1
Specify particular causal sites
#121
jeromekelleher
closed
9 months ago
5
CODE: Signature
#120
daikitag
closed
11 months ago
2
CODE: codecov
#119
daikitag
closed
11 months ago
3
Update signatures of sim_phenotype and sim_env
#118
jeromekelleher
closed
11 months ago
1
Validate against simplePHENOTYPES
#117
jeromekelleher
closed
8 months ago
1
Review # pragma: no cover usage
#116
jeromekelleher
closed
11 months ago
1
DOC: Documentation for the new sim_trait function
#115
daikitag
closed
11 months ago
1
DOC: Docstring of trait model
#114
daikitag
closed
11 months ago
2
Change "causal_state" to "causal_allele"?
#113
jeromekelleher
closed
11 months ago
1
CODE/DOC: genetic-value
#112
daikitag
closed
11 months ago
7
CODE: sim_trait
#111
daikitag
closed
11 months ago
12
CODE: New API
#110
daikitag
closed
11 months ago
5
CODE: Negative value
#109
daikitag
closed
11 months ago
2
TEST: AlphaSimR Comparison
#108
daikitag
closed
9 months ago
3
CODE: num_causal
#107
daikitag
closed
11 months ago
1
Change names of fields in return type of sim_phenotype
#106
jeromekelleher
closed
11 months ago
3
Next