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tskit-dev
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tszip
Gzip-like compression for tskit tree sequences
https://tszip.readthedocs.io/
MIT License
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6
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Deactivate RTD docs build
#89
jeromekelleher
closed
2 weeks ago
1
Fix python version
#88
benjeffery
closed
1 month ago
1
Worse compression in recent versions?
#87
hyanwong
opened
2 months ago
2
requires-python should be 3.9
#86
jeromekelleher
closed
1 month ago
3
Fix URLS
#85
benjeffery
closed
2 months ago
2
Fix wheel building
#84
benjeffery
closed
2 months ago
0
Release prep
#83
benjeffery
closed
2 months ago
1
Update actions infra, pin zarr
#82
benjeffery
closed
2 months ago
2
Pin zarr<3
#81
benjeffery
closed
2 months ago
1
Documentation out of date
#80
jeromekelleher
closed
2 months ago
2
Switch docs to jupyterbook
#79
benjeffery
closed
10 months ago
3
Move wheel creds to OIDC
#78
benjeffery
closed
10 months ago
0
Support 3.10, 3.11, remove 3.7
#77
benjeffery
closed
10 months ago
0
Fix CI
#76
benjeffery
closed
11 months ago
1
Add tskit.load
#75
benjeffery
closed
11 months ago
1
Update deps
#74
benjeffery
closed
11 months ago
0
Fix test
#73
benjeffery
closed
11 months ago
2
Update pre-commit
#72
benjeffery
closed
11 months ago
0
cannot write to stdout
#71
ShyamieG
closed
1 year ago
5
Fix codecov
#70
benjeffery
closed
10 months ago
2
Cannot handle columns > 2GiB
#69
ShyamieG
opened
1 year ago
8
Load from compressed or uncompressed
#68
jeromekelleher
closed
11 months ago
0
Docs should be transferred from readthedocs
#67
hyanwong
closed
2 months ago
6
Support opening from URLs
#66
benjeffery
opened
2 years ago
11
Edge case of decompressing legacy file with top-level metadata
#65
brianzhang01
opened
2 years ago
3
Error for more than one file with -c
#64
aabiddanda
closed
2 years ago
2
Handle multiple input files with compressing to stdout
#63
jeromekelleher
closed
2 years ago
4
Update changelog for 0.2.2
#62
jeromekelleher
closed
2 years ago
0
Update changelog
#61
benjeffery
closed
2 years ago
0
Refactor column transforms
#60
benjeffery
opened
2 years ago
1
Add support for reference sequences
#59
benjeffery
closed
2 years ago
1
Fix for time_units in tskit 0.4.1
#58
benjeffery
closed
2 years ago
2
tskit 0.4 seems to be breaking tszip tests
#57
brianzhang01
closed
2 years ago
4
Update mergify
#56
benjeffery
closed
2 years ago
0
Fix for time_units in tskit 0.4.1
#55
benjeffery
closed
2 years ago
8
New time_units field breaks compression
#54
rwaples
closed
2 years ago
5
Compressing tree-sequences to stdout
#53
aabiddanda
closed
2 years ago
8
Changelog
#52
benjeffery
closed
2 years ago
1
Update changelog for 0.2.0
#51
jeromekelleher
closed
2 years ago
0
Miscellaneous packaging stuff
#50
jeromekelleher
closed
2 years ago
2
Compress to stdout
#49
jeromekelleher
closed
2 years ago
1
Downgrade h5py, fix pytest.
#48
benjeffery
closed
2 years ago
2
Tests pass in pytest by default but not with -n0
#47
jeromekelleher
closed
2 years ago
3
h5py issue in tests
#46
jeromekelleher
closed
2 years ago
0
Require tskit >= 0.3.3 and use flexible file arg
#45
jeromekelleher
closed
2 years ago
4
cli now supports decompressing to stdout
#44
aabiddanda
closed
2 years ago
9
Use setup.cfg
#43
benjeffery
closed
3 years ago
0
Use dict representation for compress and decompress
#42
benjeffery
closed
3 years ago
3
Update badges
#41
jeromekelleher
closed
2 years ago
0
Update workflow
#40
benjeffery
closed
3 years ago
3
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