255 K Trainable params
0 Non-trainable params
255 K Total params
1.023 Total estimated model params size (MB)
Sanity Checking DataLoader 0: 0%| | 0/2 [00:00<?, ?it/s]Traceback (most recent call last):
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 287, in
cli_main()
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 277, in cli_main
LightningCLI(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py", line 566, in init
self._run_subcommand(self.subcommand)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py", line 837, in _run_subcommand
fn(fn_kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 770, in fit
self._call_and_handle_interrupt(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 723, in _call_and_handle_interrupt
return trainer_fn(*args, *kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 811, in _fit_impl
results = self._run(model, ckpt_path=self.ckpt_path)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1236, in _run
results = self._run_stage()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1323, in _run_stage
return self._run_train()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1345, in _run_train
self._run_sanity_check()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1413, in _run_sanity_check
val_loop.run()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/base.py", line 204, in run
self.advance(args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/dataloader/evaluation_loop.py", line 155, in advance
dl_outputs = self.epoch_loop.run(self._data_fetcher, dl_max_batches, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/base.py", line 204, in run
self.advance(args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/epoch/evaluation_epoch_loop.py", line 128, in advance
output = self._evaluation_step(kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/epoch/evaluation_epoch_loop.py", line 226, in _evaluation_step
output = self.trainer._call_strategy_hook("validation_step", kwargs.values())
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1765, in _call_strategy_hook
output = fn(*args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/strategies/strategy.py", line 344, in validation_step
return self.model.validation_step(*args, *kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 81, in validation_step
y_hat = self(x)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(input, kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 68, in forward
return self.backbone(x)[0]
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(*input, kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/models/ResGCNv1/nets.py", line 65, in forward
x_cat.append(branch(x[:, i]))
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(*input, *kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/models/ResGCNv1/nets.py", line 24, in forward
x = self.bn(x)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(input, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/batchnorm.py", line 168, in forward
return F.batch_norm(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/functional.py", line 2421, in batch_norm
return torch.batch_norm(
RuntimeError: running_mean should contain 5 elements not 15
I run
python gaitgraph_casia_b.py fit --config configs/casia_b.yaml
/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py:896: UserWarning: Failed parsing docstring for <function Trainer.fit at 0x7f164af54dc0>: docstring-parser package is required rank_zero_warn(f"Failed parsing docstring for {component}: docstring-parser package is required") /home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py:896: UserWarning: Failed parsing docstring for <function Trainer.validate at 0x7f164af55000>: docstring-parser package is required rank_zero_warn(f"Failed parsing docstring for {component}: docstring-parser package is required") /home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py:896: UserWarning: Failed parsing docstring for <function Trainer.test at 0x7f164af55240>: docstring-parser package is required rank_zero_warn(f"Failed parsing docstring for {component}: docstring-parser package is required") /home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py:896: UserWarning: Failed parsing docstring for <function Trainer.predict at 0x7f164af55480>: docstring-parser package is required rank_zero_warn(f"Failed parsing docstring for {component}: docstring-parser package is required") /home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py:896: UserWarning: Failed parsing docstring for <function Trainer.tune at 0x7f164af55630>: docstring-parser package is required rank_zero_warn(f"Failed parsing docstring for {component}: docstring-parser package is required") Global seed set to 5318008 GPU available: True, used: True TPU available: False, using: 0 TPU cores IPU available: False, using: 0 IPUs HPU available: False, using: 0 HPUs LOCAL_RANK: 0 - CUDA_VISIBLE_DEVICES: [0]
| Name | Type | Params
0 | backbone | ResGCN | 255 K 1 | distance | LpDistance | 0
2 | train_loss | SupConLoss | 0
3 | val_loss | ContrastiveLoss | 0
255 K Trainable params 0 Non-trainable params 255 K Total params 1.023 Total estimated model params size (MB) Sanity Checking DataLoader 0: 0%| | 0/2 [00:00<?, ?it/s]Traceback (most recent call last): File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 287, in
cli_main()
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 277, in cli_main
LightningCLI(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py", line 566, in init
self._run_subcommand(self.subcommand)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/utilities/cli.py", line 837, in _run_subcommand
fn(fn_kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 770, in fit
self._call_and_handle_interrupt(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 723, in _call_and_handle_interrupt
return trainer_fn(*args, *kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 811, in _fit_impl
results = self._run(model, ckpt_path=self.ckpt_path)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1236, in _run
results = self._run_stage()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1323, in _run_stage
return self._run_train()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1345, in _run_train
self._run_sanity_check()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1413, in _run_sanity_check
val_loop.run()
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/base.py", line 204, in run
self.advance(args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/dataloader/evaluation_loop.py", line 155, in advance
dl_outputs = self.epoch_loop.run(self._data_fetcher, dl_max_batches, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/base.py", line 204, in run
self.advance(args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/epoch/evaluation_epoch_loop.py", line 128, in advance
output = self._evaluation_step(kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/loops/epoch/evaluation_epoch_loop.py", line 226, in _evaluation_step
output = self.trainer._call_strategy_hook("validation_step", kwargs.values())
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/trainer/trainer.py", line 1765, in _call_strategy_hook
output = fn(*args, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/pytorch_lightning/strategies/strategy.py", line 344, in validation_step
return self.model.validation_step(*args, *kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 81, in validation_step
y_hat = self(x)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(input, kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/gaitgraph_casia_b.py", line 68, in forward
return self.backbone(x)[0]
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(*input, kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/models/ResGCNv1/nets.py", line 65, in forward
x_cat.append(branch(x[:, i]))
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(*input, *kwargs)
File "/home/brianw0924/Desktop/GaitGraph2/GaitGraph/models/ResGCNv1/nets.py", line 24, in forward
x = self.bn(x)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/module.py", line 1110, in _call_impl
return forward_call(input, kwargs)
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/modules/batchnorm.py", line 168, in forward
return F.batch_norm(
File "/home/brianw0924/anaconda3/envs/GaitGraph2/lib/python3.10/site-packages/torch/nn/functional.py", line 2421, in batch_norm
return torch.batch_norm(
RuntimeError: running_mean should contain 5 elements not 15
I run
python gaitgraph_casia_b.py fit --config configs/casia_b.yaml
and get this
Hi, can you please tell me how to fix this error?