mims_plant_associated_set validation errors against provided examples

[turbomam]

poetry run check-jsonschema --schemafile project/jsonschema/mixs_subset_examples_first.schema.json 

• antibiotic_regm: 'penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M' does not match '(([^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?)\|)[^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]*/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
• chem_mutagen: 'nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
• fertilizer_regm: 'urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
• fungicide_regm: 'bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
• gaseous_environment: 'nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+;R[+-]?[1-9][0-9]/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/\d{4}-\d\d-\d\d[Tt]\d\d:\d\d(:\d\d(\.\d+)?([Zz]|[\+\-]\d\d:\d\d)?)?/P(?=\d+[YMWD])(\d+Y)?(\d+M)?(\d+W)?(\d+D)?(T(?=\d+[HMS])(\d+H)?(\d+M)?(\d+S)?)?'
• host_taxid: 9606 is not of type 'string'
• ref_db: 'pVOGs;5;http://dmk-brain.ecn.uiowa.edu/pVOGs/ Grazziotin et al. 2017 doi:10.1093/nar/gkw975' does not match '[^s\|][^\r\n\t\|]+;[^s\|][^\r\n\t\|]+;[^s\|][^\r\n\t\|]+'
• root_med_micronutr: 'H3BO3 (6.2 mg/L)' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+'
• root_med_suppl: 'nicotinic acid (0.5 mg/L)' does not match '[^s\|][^\r\n\t\|]+;[-+]?[0-9]*\.?[0-9]+([eE][-+]?[0-9]+)? [^s\|][^\r\n\t\|]+'
• samp_taxon_id: 'Gut Metagenome [NCBI:txid749906]' does not match '[^s\|][^\r\n\t\|]+ [NCBITaxon:[0-9]+]'