Question about the tf_family.txt mentioned in getMotif2Gene(...)

tzhu-bio / cisDynet

An integrated platform for modeling gene-regulatory dynamics and networks

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Question about the tf_family.txt mentioned in getMotif2Gene(...) #3

Open yashi99 opened 8 months ago

yashi99 commented 8 months ago

Hi, in the chapter 11.5 getMotif2Gene of the manual, you mentioned that a _tffamily.txt file should be prepared, but I am not familiar with such data. Could you please give some advice about how to get such a _tffamily.txt? Thank you!

tzhu-bio commented 8 months ago

You can download the tf family information at http://bioinfo.life.hust.edu.cn/AnimalTFDB/#!/download.

yashi99 commented 8 months ago

That's great! Thank you!