uclahs-cds / package-moPepGen

Multi-Omics Peptide Generator
https://uclahs-cds.github.io/package-moPepGen/
GNU General Public License v2.0
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Cache genome sequence #860

Open zhuchcn opened 8 months ago

zhuchcn commented 8 months ago

The entire genome is read into memory. This can be avoided by turning it into a memory-mapped data structure similar to the GenomicAnnotationOnDisk class. This will reduce the memory usage (for at least 1-2 GB).