issues
search
ucscXena
/
XenaGoWidget
Xena Gene Set Viewer (demo: http://xenademo.berkeleybop.io/xena)
https://xenageneset.berkeleybop.io/xena/
BSD 3-Clause "New" or "Revised" License
2
stars
5
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
UI notes on Xena -> redraw
#639
nathandunn
closed
3 years ago
2
add Hallmark geneset
#638
nathandunn
closed
3 years ago
1
add caching of server with unique genes as key
#637
nathandunn
closed
4 years ago
1
add a download GMT button
#636
nathandunn
closed
4 years ago
0
updated icon and some of the wording
#635
nathandunn
closed
4 years ago
0
fix description text
#634
nathandunn
closed
4 years ago
1
started upload process
#633
nathandunn
closed
4 years ago
3
moved UI 1
#632
nathandunn
closed
4 years ago
0
implement BPA analysis service
#631
nathandunn
closed
4 years ago
3
GeneSet Editor UI discussion
#630
nathandunn
closed
4 years ago
1
bug with CNV + Muttations in some instances
#629
nathandunn
closed
4 years ago
1
remove / disallow "custom gene sets"
#628
nathandunn
closed
4 years ago
0
sets the name for the proper search
#627
nathandunn
closed
4 years ago
0
for mutation (and thus CNV + mutation), need to have a column per gene
#626
nathandunn
closed
4 years ago
0
we should be able to have a sample "hidden" column of only `sampleID` to do filtering?
#625
nathandunn
closed
4 years ago
0
if same cohort on both sides, then filter for ONLY the samples and add a sample column for one versus the other
#624
nathandunn
closed
4 years ago
0
"save" on gene set editor should trigger a view update
#623
nathandunn
closed
4 years ago
0
save and view fails to sort
#622
nathandunn
closed
4 years ago
0
Fix 613 v2
#621
nathandunn
closed
4 years ago
0
redo readme
#620
nathandunn
closed
3 years ago
1
add xena gene sets link outs for CNV + Mutation
#619
nathandunn
closed
4 years ago
0
fix title to use ... and pop-up / title for full
#618
nathandunn
closed
4 years ago
0
if only group selected is unassigned, can not save new genest view
#617
nathandunn
closed
4 years ago
0
implement new gene set editor
#616
nathandunn
closed
4 years ago
0
BPA data set analysis /web service
#615
nathandunn
closed
4 years ago
1
handle CNV + Mutation for the Gene Set Editor
#614
nathandunn
closed
4 years ago
0
finish out rest of gene set editor UI (ideas)
#613
nathandunn
closed
4 years ago
1
set gene sets should be in the URL
#612
nathandunn
closed
4 years ago
0
Fix 608
#611
nathandunn
closed
4 years ago
0
provide a way to select genesets by name or by genesets
#610
nathandunn
closed
4 years ago
1
Geneset configuration
#609
jingchunzhu
closed
4 years ago
1
simplify Geneset configuration UI
#608
jingchunzhu
closed
4 years ago
1
Fix 605
#607
nathandunn
closed
4 years ago
0
Fix load geneset
#606
nathandunn
closed
4 years ago
0
restrict ucsc client iFrame using theme and add a close box to popup and match css / style to the rest of Xena
#605
nathandunn
closed
4 years ago
0
integrate additional GO BP gene sets
#604
nathandunn
closed
3 years ago
6
fix multiple gene set editor fixes
#603
nathandunn
closed
4 years ago
0
fixes #593
#602
nathandunn
closed
4 years ago
0
fixes #535
#601
nathandunn
closed
4 years ago
0
build out as an npm module and integrate as an npm module
#600
nathandunn
closed
4 years ago
1
UI styling
#599
maryjgoldman
closed
3 years ago
3
Offer a default selection
#598
maryjgoldman
closed
4 years ago
1
update banner on pop-up
#597
maryjgoldman
closed
3 years ago
2
Update help information
#596
maryjgoldman
closed
3 years ago
1
geneset editor is not firing off updates when changing sorting
#595
nathandunn
closed
4 years ago
2
provide a generic model for uploading GeneSets and having them get BPA analyzed
#594
nathandunn
closed
4 years ago
2
fix dialog sizes
#593
nathandunn
closed
4 years ago
2
if no subcohorts selected, then we should still allow `save`
#592
nathandunn
closed
4 years ago
0
fix horizontal crosshair
#591
nathandunn
closed
4 years ago
0
evaluate Bader lab genesets with BPA
#590
nathandunn
closed
4 years ago
1
Previous
Next