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cmm262-notebook
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refer to biom262 repo instead
#38
aryarm
closed
8 months ago
0
add wi23 networks env
#37
aryarm
closed
1 year ago
0
Wi23 variant calling updates
#36
hmummey
closed
1 year ago
0
recreate scanpy env from export
#35
aryarm
closed
1 year ago
0
recreate scanpy env completely from export
#34
aryarm
closed
1 year ago
0
Merge rebuild back
#33
aryarm
closed
1 year ago
0
Try to force rebuild
#32
aryarm
closed
1 year ago
0
Fix scanpy matplotlib issue and remove rna seq env
#31
aryarm
closed
1 year ago
0
Downgrade matplotlib to fix scanpy import issue
#30
aryarm
closed
1 year ago
0
fix scanpy and matplotlib incompatibility v3.7
#29
aryarm
closed
1 year ago
0
Wi23 rnaseq
#28
daniellavo
closed
1 year ago
0
force 2023 rebuild
#27
aryarm
closed
1 year ago
0
force 2023 rebuild
#26
aryarm
closed
1 year ago
0
add image processing module to wi23 environment
#25
aryarm
closed
1 year ago
1
Wi23
#24
Jaureguy760
closed
1 year ago
1
Wi23 stats
#23
Jaureguy760
closed
1 year ago
0
create 2024 container
#22
aryarm
closed
1 year ago
1
Remove unnecessary packages from scRNA-seq env
#21
hmummey
closed
1 year ago
0
Integrate Spatialtx docker img and env into ucsd-ets/cmm262-notebook
#20
Jaureguy760
closed
1 year ago
0
Wi24 intro to stats
#19
Jaureguy760
closed
1 year ago
0
add kernels to all conda envs
#18
aryarm
closed
1 year ago
0
revert to old github action
#17
aryarm
closed
1 year ago
0
sync stable with newest changes
#16
aryarm
closed
1 year ago
0
add intro to programming R env
#15
aryarm
closed
1 year ago
0
follow best practices in all conda envs
#14
aryarm
closed
1 year ago
1
add docker layer caching and `nb_conda_kernels`
#13
aryarm
closed
1 year ago
4
Use `conda-lock` to speed up builds
#12
aryarm
opened
1 year ago
2
Ghcr
#11
wesuuu
closed
1 year ago
1
use `nb_conda_kernels` instead of installing each kernel manually
#10
aryarm
closed
1 year ago
2
allow PRs from fork to run CI with secrets
#9
aryarm
closed
1 year ago
2
install r-bio python kernel to be available to Jupyter
#8
aryarm
closed
2 years ago
0
tbb downgrade
#7
wesuuu
closed
2 years ago
0
Update variant_calling.yml
#6
ekofman
closed
2 years ago
1
Added bcftools=1.14
#5
ekofman
closed
2 years ago
0
typo in R_LIBS_SITE env variable?
#4
aryarm
opened
2 years ago
0
install the tree command
#3
aryarm
closed
2 years ago
0
add spatial-tx env
#2
ckmah
closed
3 years ago
0
Update scanpy_2021.yaml
#1
ckmah
closed
3 years ago
0