uio-bmi graph_peak_caller issues - Githubissues

uio-bmi / graph_peak_caller

ChIP-seq peak caller for reads mapped to a graph-based reference genome

BSD 3-Clause "New" or "Revised" License

19 stars 8 forks source link

issues

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pip3 version of preprocess_interface.py has incorrect line 84

#15 adadiehl opened 1 year ago
0
peaks_to_linear error

#14 sdws1983 opened 1 year ago
0
assert not unfinished, unfinished error

#13 peterdfields opened 1 year ago
1
create_ob_graph

#12 sdws1983 closed 1 year ago
12
create_ob_graph failure

#11 byoo opened 3 years ago
6
Graph peak caller returns negative node ids

#10 cgroza closed 4 years ago
12
Error in creating linear map when in ATAC-seq mode

#9 huangyizR opened 4 years ago
1
Peak calling with ATAC-seq data

#8 RenzoTale88 opened 4 years ago
26
Skip paths for which path.to_obg() returns False.

#7 cgroza opened 5 years ago
0
Any way to render the peaks on top of a graph?

#6 cgroza opened 5 years ago
1
Issues with chromosome splitting and shift estimation

#5 RicciAle closed 5 years ago
4
Graph peak caller and MACS2 - Different peak numbers

#4 cgroza closed 5 years ago
7
Understanding max_paths.intervalcollection structure

#3 RicciAle closed 5 years ago
2
Create LICENSE

#2 ivargr closed 6 years ago
0
Converting from ob numpy graph to dict-base graph

#1 ivargr closed 6 years ago
0