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umccr
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cwl-ica
A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
MIT License
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[GitHub Actions] Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240627030521
#515
github-actions[bot]
closed
4 months ago
0
[GitHub Actions] Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240627011541
#514
github-actions[bot]
closed
4 months ago
0
[GitHub Actions] Images and configuration commits for release dragen-alignment-pipeline__4.2.4__20240626104741
#513
github-actions[bot]
closed
4 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240626083949
#512
github-actions[bot]
closed
4 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240626082710
#511
github-actions[bot]
closed
4 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240626053918
#510
github-actions[bot]
closed
4 months ago
0
Try fix GITHUB_WORKSPACE directory to add as a safe directory
#509
alexiswl
closed
4 months ago
0
Hardcode user to 'ubuntu'
#508
alexiswl
closed
4 months ago
0
New base docker image already comes with non-root user (ubuntu)
#507
alexiswl
closed
4 months ago
0
Added validation and reference datasets for wgs and wts
#506
alexiswl
closed
4 months ago
1
Create rnasum and umccrise single-step workflows
#505
alexiswl
closed
4 months ago
0
Bugfix, as per the 2.25 release notes, tmpdirmin must be a requirement
#504
alexiswl
closed
4 months ago
1
Rename run_id to instrument run id for the bclconvert interop qc
#503
alexiswl
closed
4 months ago
0
Bump braces from 3.0.2 to 3.0.3 in /expressions/get-bam-file-from-directory/1.0.1/typescript-expressions
#502
dependabot[bot]
closed
4 months ago
1
Use this new role to generate bundles in icav2
#501
alexiswl
closed
4 months ago
0
Remove softlinks for multiqc commands
#500
alexiswl
closed
4 months ago
1
Generate / Plot and compress imaging table
#499
alexiswl
closed
4 months ago
1
Update GH Action user from pipelines-trial to pipelines user
#498
alexiswl
closed
4 months ago
0
Update multiqc commands to be ICAv2 compatible
#497
alexiswl
closed
4 months ago
0
Add InlineJavascriptRequirement
#496
skanwal
closed
5 months ago
1
RNAsum v1.0.0
#495
skanwal
closed
5 months ago
0
Use dragen typescript tools for dragen ht reference builder
#494
alexiswl
closed
5 months ago
0
Initialise RNAsum 0.6.5
#493
skanwal
closed
5 months ago
0
interop: imaging_table
#492
pdiakumis
closed
4 months ago
0
Bump tar from 6.1.13 to 6.2.1 in /typescript-expressions/umccrise/2.0.0
#491
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.13 to 6.2.1 in /typescript-expressions/multiqc-tools/1.0.0
#490
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.12 to 6.2.1 in /expressions/get-bam-file-from-directory/1.0.1-rabix/typescript-expressions
#489
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1 in /typescript-expressions/dragen-tools/4.0.3
#488
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1 in /typescript-expressions/bclconvert-run-configuration-expressions/2.0.0--4.0.3
#487
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1 in /typescript-expressions/samplesheet-builder/2.0.0--4.0.3
#486
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1 in /typescript-expressions/utils/1.0.0
#485
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1 in /expressions/get-bam-file-from-directory/1.0.1/typescript-expressions
#484
dependabot[bot]
closed
5 months ago
0
Bump tar from 6.1.11 to 6.2.1
#483
dependabot[bot]
closed
5 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240410040204
#482
github-actions[bot]
closed
5 months ago
0
Added rnasum 0.5.0 to production_workflows project
#481
alexiswl
closed
6 months ago
0
Update rnasum input parameters
#480
skanwal
closed
6 months ago
5
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.21__20240313015132
#479
github-actions[bot]
closed
7 months ago
0
Added new bclconvert interop qc with new multiqc version
#478
alexiswl
closed
7 months ago
2
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.19__20240312031410
#477
github-actions[bot]
closed
7 months ago
0
Get username and email from user who generated tag
#476
alexiswl
closed
7 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.19__202403122095003
#475
alexiswl
closed
7 months ago
0
Images and configuration commits for release bclconvert-interop-qc__1.3.1--1.19__20240311075804
#474
alexiswl
closed
7 months ago
0
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/umccrise/2.0.0
#473
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/multiqc-tools/1.0.0
#472
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/dragen-tools/4.0.3
#471
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/utils/1.0.0
#470
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/samplesheet-builder/2.0.0--4.0.3
#469
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /typescript-expressions/bclconvert-run-configuration-expressions/2.0.0--4.0.3
#468
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /expressions/get-bam-file-from-directory/1.0.1-rabix/typescript-expressions
#467
dependabot[bot]
closed
7 months ago
1
Bump ip from 2.0.0 to 2.0.1 in /expressions/get-bam-file-from-directory/1.0.1/typescript-expressions
#466
dependabot[bot]
closed
7 months ago
1
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