CMORprojects

The goal of CMORprojects is to provide tools to optimise a research project data analysis workflow for research projects undertaken at CMOR.

Installation

You can install the latest version of CMORprojects from GitHub with:

install.packages("remotes")
remotes::install_github("uo-cmor/CMORprojects")

Functions

Create a new research project folder:

# create_research_project("~/path/to/project/folder")

Create a target to render RMarkdown report to docx file in a targets pipeline:

# targets <- list(
#   tar_file(data_file, "raw_data/data.csv"),
#   tar_target(data, read_raw_data(data_file)),
#   tar_target(analysis, do_some_analysis(data)),
#   tar_file(file_word_styles, "output/word-styles-reference-01.docx"),
#   tar_file(file_csl, "output/vancouver.csl"),
#   tar_file(file_bib, "output/references.bib"),
#   tar_render_manuscript(manuscript, "output/manuscript.Rmd", "output/manuscript.docx",
#                         file_word_styles, file_csl, file_bib)
# )