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varfish-org
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varfish-cli
VarFish REST API client (CLI + Python package)
MIT License
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3
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ci: install setuptools to fix "python sdist" in release-please
#87
holtgrewe
closed
10 months ago
0
feat: conversion from DRAGEN QC to legacy varfish format (#85)
#86
holtgrewe
closed
10 months ago
1
Conversion from DRAGEN QC files to legacy coverage qc format.
#85
holtgrewe
closed
10 months ago
0
chore(deps): update jsonschema requirement from <4.21,>=4.4 to >=4.4,<4.22
#84
dependabot[bot]
closed
10 months ago
0
chore(deps): bump black from 23.12.0 to 23.12.1
#83
dependabot[bot]
closed
11 months ago
1
chore(deps): bump isort from 5.13.0 to 5.13.2
#82
dependabot[bot]
closed
11 months ago
0
chore(deps): bump black from 23.11.0 to 23.12.0
#81
dependabot[bot]
closed
11 months ago
0
chore(deps): bump isort from 5.12.0 to 5.13.0
#80
dependabot[bot]
closed
11 months ago
0
chore(deps): update jsonschema requirement from <4.20,>=4.4 to >=4.4,<4.21
#79
dependabot[bot]
closed
12 months ago
0
chore(deps): update jsonschema requirement from <4.20,>=4.4 to >=4.4,<4.21
#78
dependabot[bot]
closed
1 year ago
0
chore(deps): bump black from 23.10.1 to 23.11.0
#77
dependabot[bot]
closed
1 year ago
0
chore(deps): update jsonschema requirement from <4.5,>=4.4 to >=4.4,<4.20
#76
dependabot[bot]
closed
1 year ago
0
chore(deps): update typeguard requirement from <3.0,>=2.13.3 to >=2.13.3,<5.0
#75
dependabot[bot]
closed
1 year ago
0
chore(deps): update tabulate requirement from <0.9,>=0.8.9 to >=0.8.9,<0.10
#74
dependabot[bot]
closed
1 year ago
0
Extend phenopacket YAML bootstrapping
#73
holtgrewe
opened
1 year ago
0
feat: support for new-style imports (#70)
#72
holtgrewe
opened
1 year ago
2
Adjust varfish-server manual for updates in CLI interface
#71
holtgrewe
opened
1 year ago
0
Implement support for new-style imports
#70
holtgrewe
opened
1 year ago
3
docs: installation instructions in manual
#69
holtgrewe
closed
1 year ago
1
docs: updating README, adding terraform docs
#68
holtgrewe
closed
1 year ago
0
chore: add codecov.yml
#67
holtgrewe
closed
1 year ago
0
refactor: reduce redundancy in error handling
#66
holtgrewe
closed
1 year ago
0
feat: migration from attrs to pydantic (#49)
#65
holtgrewe
closed
1 year ago
2
build: .readthedocs.yaml v2
#64
holtgrewe
closed
1 year ago
0
chore: bump GitHub action versions
#63
holtgrewe
closed
1 year ago
0
chore: add .readthedocs.yml
#62
holtgrewe
closed
1 year ago
1
feat: migrate argparse code to typer (#48)
#61
holtgrewe
closed
1 year ago
2
chore(deps): update cattrs requirement from <2.0,>=1.7.1 to >=1.7.1,<24.0
#60
dependabot[bot]
closed
1 year ago
1
ci: configure dependabot for scopes
#59
holtgrewe
closed
1 year ago
1
chore(deps): bump tox from 2.9.1 to 4.11.3
#58
dependabot[bot]
closed
1 year ago
1
chore: add automerge workflow
#57
holtgrewe
closed
1 year ago
1
chore(deps): bump isort from 5.10.1 to 5.12.0
#56
dependabot[bot]
closed
1 year ago
1
chore(deps): bump black from 22.3.0 to 23.10.1
#55
dependabot[bot]
closed
1 year ago
1
chore(deps): update jsonschema requirement from <4.5,>=4.4 to >=4.4,<4.20
#54
dependabot[bot]
closed
1 year ago
4
chore(deps): update attrs requirement from <22.0,>=21.2.0 to >=21.2.0,<24.0
#53
dependabot[bot]
closed
1 year ago
2
chore: some cleanup (includes removal of versioneer)
#52
holtgrewe
closed
1 year ago
1
chore(main): release 0.6.0
#51
varfish-bot
closed
10 months ago
2
feat: add "projects project-list" command
#50
holtgrewe
closed
1 year ago
1
Migrate to pydantic rather than attrs
#49
holtgrewe
closed
1 year ago
0
Migrate argparse code to typer
#48
holtgrewe
closed
1 year ago
0
chore(main): release 0.5.3
#47
varfish-bot
closed
1 year ago
1
feat: force release of 0.6
#46
holtgrewe
closed
1 year ago
0
ci: use varfish-bot token in BOT_TOKEN of CI
#45
holtgrewe
closed
1 year ago
2
chore: release 0.5.2
#44
github-actions[bot]
closed
1 year ago
0
fix: allow varfish upload without SV effects
#43
holtgrewe
closed
1 year ago
1
chore: release 0.5.2
#42
github-actions[bot]
closed
1 year ago
0
chore: release 0.5.2
#41
github-actions[bot]
closed
1 year ago
1
Creating a small var query from a shortcut results in an error
#40
stolpeo
closed
1 year ago
2
Listing cases points to wrong URL
#39
stolpeo
closed
1 year ago
1
Help manual is missing options
#38
danidey
closed
1 year ago
1
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