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veit / jupyter-tutorial

Training materials for setting up and using a research infrastructure based on Jupyter notebooks: https://cusy.io/en/seminars
https://jupyter-tutorial.readthedocs.io/
BSD 3-Clause "New" or "Revised" License
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Scheduled weekly dependency update for week 30 #160

Closed pyup-bot closed 2 years ago

pyup-bot commented 2 years ago

Update debugpy from 1.6.0 to 1.6.2.

Changelog ### 1.6.2 ``` Fixes unintentional breaking change in public API in debugpy 1.6.1 (975). Other fixes: 969 ``` ### 1.6.1 ``` debugpy API now has type annotations. Optimizations based on frame evaluation API are re-enabled by default. Other improvements: 743, 774, 893, 945 Bug fixes: 705, 731, 861, 865, 882, 889, 896, 915, 921, 928, 934 ```
Links - PyPI: https://pypi.org/project/debugpy - Changelog: https://pyup.io/changelogs/debugpy/ - Homepage: https://aka.ms/debugpy

Update docutils from 0.18.1 to 0.19.

Changelog ### 0.19 ``` ========================= ``` ### 0.19b1 ``` * Drop support for Python 2.7, 3.5, and 3.6. * Output changes: HTML5: Wrap groups of footnotes in an ``<aside>`` for easier styling. The CSS rule ``.footnote-list { display: contents; }`` can be used to restore the behaviour of custom CSS styles. * After package installation, the CLI commands ``python -m docutils`` and ``docutils`` start the `generic command line front end tool`__. __ docs/user/tools.htmlgeneric-command-line-front-end * Support parsing "Markdown" input with 3rd party parsers myst_, pycmark_, or recommonmark_. * The default values for the "pep-references", "rfc-base-url", and "python-home" `configuration settings`_ now use the "https:" scheme. The PEP-writer template's header is updated to fix links and resemble the header of official PEPs. * Various bugfixes and improvements (see HISTORY_). .. _myst: https://pypi.org/project/myst-docutils .. _pycmark: https://pypi.org/project/pycmark/ .. _recommonmark: https://pypi.org/project/recommonmark/ .. _configuration settings: docs/user/config.html ```
Links - PyPI: https://pypi.org/project/docutils - Changelog: https://pyup.io/changelogs/docutils/ - Homepage: https://docutils.sourceforge.io/

Update fastjsonschema from 2.15.3 to 2.16.1.

Changelog ### 2.16.1 ``` * Fix uniqueItems when explicitly set to False ``` ### 2.16.0 ``` * Fix generating invalid code for some schemas using items * Preserving full path in combination with $ref * Improved error messages for oneOf and anyOf ```
Links - PyPI: https://pypi.org/project/fastjsonschema - Changelog: https://pyup.io/changelogs/fastjsonschema/ - Repo: https://github.com/horejsek/python-fastjsonschema

Update importlib-resources from 5.8.0 to 5.9.0.

Changelog ### 5.9.0 ``` ====== * 228: ``as_file`` now also supports a ``Traversable`` representing a directory and (when needed) renders the full tree to a temporary directory. ``` ### 5.8.1 ``` ====== * 253: In ``MultiplexedPath``, restore expectation that a compound path with a non-existent directory does not raise an exception. ```
Links - PyPI: https://pypi.org/project/importlib-resources - Changelog: https://pyup.io/changelogs/importlib-resources/ - Repo: https://github.com/python/importlib_resources

Update ipykernel from 6.15.0 to 6.15.1.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/ipykernel

Update jsonschema from 4.6.1 to 4.7.2.

Changelog ### 4.7.2 ``` ------ * Also have ``best_match`` handle cases where the ``type`` validator is an array. ``` ### 4.7.1 ``` ------ * Minor tweak of the PyPI hyperlink names ``` ### 4.7.0 ``` ------ * Enhance ``best_match`` to prefer errors from branches of the schema which match the instance's type (728) ``` ### 4.6.2 ``` ------ * Fix a number of minor typos in docstrings, mostly private ones (969) ```
Links - PyPI: https://pypi.org/project/jsonschema - Changelog: https://pyup.io/changelogs/jsonschema/

Update jupyter-core from 4.10.0 to 4.11.1.

Changelog ### 4.11.1 ``` ~~~~~~ `on GitHub <https://github.com/jupyter/jupyter_core/releases/tag/4.11.1>`__ * Fix inclusion of jupyter file and check in CI. (:ghpull:`276`) ``` ### 4.11 ``` ---- ``` ### 4.11.0 ``` ~~~~~~ `on GitHub <https://github.com/jupyter/jupyter_core/releases/tag/4.11.0>`__ * Use hatch build backend. (:ghpull:`265`) * ``is_hidden``: Use normalized paths. (:ghpull:`271`) ```
Links - PyPI: https://pypi.org/project/jupyter-core - Changelog: https://pyup.io/changelogs/jupyter-core/

Update mistune from 0.8.4 to 2.0.4.

Changelog ### 2.0.4 ``` ~~~~~~~~~~~~~ Released on Jul 15, 2022 * Fix ``url`` plugin in ``<a>`` tag * Fix ``*`` formatting ``` ### 2.0.3 ``` ~~~~~~~~~~~~~ Released on Jun 27, 2022 * Fix ``table`` plugin * Security fix for CVE-2022-34749 ``` ### 2.0.2 ``` ~~~~~~~~~~~~~ Released on Jan 14, 2022 Fix ``escape_url`` ``` ### 2.0.1 ``` ~~~~~~~~~~~~~ Released on Dec 30, 2021 XSS fix for image link syntax. ``` ### 2.0.0 ``` ~~~~~~~~~~~~~ Released on Dec 5, 2021 This is the first non-alpha release of mistune v2. ``` ### 2.0.0rc1 ``` ~~~~~~~~~~~~~~~ Released on Feb 16, 2021 ``` ### 2.0.0a6 ``` ~~~~~~~~~~~~~~~ Released on Nov 26, 2020 ``` ### 2.0.0a5 ``` ~~~~~~~~~~~~~~~ Released on Sep 2, 2020 ``` ### 2.0.0a4 ``` ~~~~~~~~~~~~~~~ Released on Apr 19, 2020 ``` ### 2.0.0a3 ``` ~~~~~~~~~~~~~~~ Released on Apr 11, 2020 ``` ### 2.0.0a2 ``` ~~~~~~~~~~~~~~~ Released on Jan 1, 2020 ``` ### 2.0.0a1 ``` ~~~~~~~~~~~~~~~ Released on Dec 7, 2019 This is the first release of v2. Features included: * whole new mistune * plugins * directives ```
Links - PyPI: https://pypi.org/project/mistune - Changelog: https://pyup.io/changelogs/mistune/ - Repo: https://github.com/lepture/mistune

Update numpy from 1.23.0 to 1.23.1.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/numpy - Homepage: https://www.numpy.org

Update Sphinx from 5.0.2 to 5.1.0.

Changelog ### 5.1.0 ``` ===================================== Dependencies ------------ * 10656: Support `Docutils 0.19`_. Patch by Adam Turner. .. _Docutils 0.19: https://docutils.sourceforge.io/RELEASE-NOTES.html#release-0-19-2022-07-05 Deprecated ---------- * 10467: Deprecated ``sphinx.util.stemmer`` in favour of ``snowballstemmer``. Patch by Adam Turner. * 9856: Deprecated ``sphinx.ext.napoleon.iterators``. Features added -------------- * 10444: html theme: Allow specifying multiple CSS files through the ``stylesheet`` setting in ``theme.conf`` or by setting ``html_style`` to an iterable of strings. * 10366: std domain: Add support for emphasising placeholders in :rst:dir:`option` directives through a new :confval:`option_emphasise_placeholders` configuration option. * 10439: std domain: Use the repr of some variables when displaying warnings, making whitespace issues easier to identify. * 10571: quickstart: Reduce content in the generated ``conf.py`` file. Patch by Pradyun Gedam. * 10648: LaTeX: CSS-named-alike additional :ref:`'sphinxsetup' <latexsphinxsetup>` keys allow to configure four separate border-widths, four paddings, four corner radii, a shadow (possibly inset), colours for border, background, shadow for each of the code-block, topic, attention, caution, danger, error and warning directives. * 10655: LaTeX: Explain non-standard encoding in LatinRules.xdy * 10599: HTML Theme: Wrap consecutive footnotes in an ``<aside>`` element when using Docutils 0.18 or later, to allow for easier styling. This matches the behaviour introduced in Docutils 0.19. Patch by Adam Turner. * 10518: config: Add ``include_patterns`` as the opposite of ``exclude_patterns``. Patch by Adam Turner. Bugs fixed ---------- * 10594: HTML Theme: field term colons are doubled if using Docutils 0.18+ * 10596: Build failure if Docutils version is 0.18 (not 0.18.1) due to missing ``Node.findall()`` * 10506: LaTeX: build error if highlighting inline code role in figure caption (refs: 10251) * 10634: Make -P (pdb) option work better with exceptions triggered from events * 10031: py domain: Fix spurious whitespace in unparsing various operators (``+``, ``-``, ``~``, and ``**``). Patch by Adam Turner. * 10460: logging: Always show node source locations as absolute paths. * HTML Search: HTML tags are displayed as a part of object name * HTML Search: search snipets should not be folded * HTML Search: Minor errors are emitted on fetching search snipets * HTML Search: The markers for header links are shown in the search result * 10520: HTML Theme: Fix use of sidebar classes in ``agogo.css_t``. * 6679: HTML Theme: Fix inclusion of hidden toctrees in the agogo theme. * 10566: HTML Theme: Fix enable_search_shortcuts does not work * 8686: LaTeX: Text can fall out of code-block at end of page and leave artifact on next page * 10633: LaTeX: user injected ``\color`` commands in topic or admonition boxes may cause color leaks in PDF due to upstream `framed.sty <https://ctan.org/pkg/framed>`_ bug * 10638: LaTeX: framed coloured boxes in highlighted code (e.g. highlighted diffs using Pygments style ``'manni'``) inherit thickness of code-block frame * 10647: LaTeX: Only one ``\label`` is generated for ``desc_signature`` node even if it has multiple node IDs * 10579: i18n: UnboundLocalError is raised on translating raw directive * 9577, 10088: py domain: Fix warning for duplicate Python references when using ``:any:`` and autodoc. * 10548: HTML Search: fix minor summary issues. ```
Links - PyPI: https://pypi.org/project/sphinx - Changelog: https://pyup.io/changelogs/sphinx/ - Homepage: https://www.sphinx-doc.org/

Update urllib3 from 1.26.9 to 1.26.10.

The bot wasn't able to find a changelog for this release. Got an idea?

Links - PyPI: https://pypi.org/project/urllib3 - Changelog: https://pyup.io/changelogs/urllib3/ - Docs: https://urllib3.readthedocs.io/

Update zipp from 3.8.0 to 3.8.1.

Changelog ### 3.8.1 ``` ====== Refreshed packaging. Enrolled with Tidelift. ```
Links - PyPI: https://pypi.org/project/zipp - Changelog: https://pyup.io/changelogs/zipp/ - Repo: https://github.com/jaraco/zipp
pyup-bot commented 2 years ago

Closing this in favor of #162